myRT

myRT report for GCA_000818985.1_Escherichia_coli_CVM_N33857PS_v1.0

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Seq: JWZK01000055.1 (20051 bp)
Overview 1 RT 1: 14916-19969 bp Neighborhood of RT #1 [14916, 19983] RVT-Retrons COG3680 PinE Feature: gene Location: 14916-15068 bp Feature: gene Location: 15786-15938 bp Feature: gene Location: 16051-17886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16186-16882 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 61 86-1 6882 bp Feature: gene Location: 18598-19371 bp Feature: domain Description: COG3680 Location: 18601-19369 bp Feature: domain Description: COG3680 Location: 1 8601 -1 9369 bp Feature: gene Location: 19429-19983 bp Feature: domain Description: PinE Location: 19432-19969 bp Feature: domain Description: PinE Location: 1 9432-1 9969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3680 (Uncharacterized protein ), PinE (COG1961)

Seq: JWZK01000057.1 (27819 bp)
Overview 1 RT 1: 15020-20339 bp Neighborhood of RT #1 [15020, 20339] PtsN LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 15020-15463 bp Feature: domain Description: PtsN Location: 15023-15458 bp Feature: domain Description: PtsN Location: 1502 3-15458 bp Feature: gene Location: 15734-16765 bp Feature: domain Description: LacI Location: 15776-15911 bp Feature: domain Description: LacI Location: 15776-15911 bp Feature: domain Description: PBP1_GntR Location: 15950-16760 bp Feature: domain Description: PBP1_GntR Location: 15950-16760 bp Feature: gene Location: 17292-18098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17295-17658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 95-17658 bp Feature: domain Description: GIIM Note: maturase Location: 17706-17928 bp Feature: domain Description: GIIM Note: maturase Location: 17706-1792 8 bp Feature: gene Location: 18116-18550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18308-18524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18308-1852 4 bp Feature: gene Location: 19459-19785 bp Feature: gene Location: 19995-20339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PtsN (COG1762), LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)