myRT

myRT report for GCA_000819185.1_Escherichia_coli_CVM_N36113PS_v1.0

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Seq: JWZC01000036.1 (36939 bp)
Overview 1 RT 1: 21840-24711 bp Neighborhood of RT #1 [21840, 24728] DDE_Tnp_IS66_C GIIM RVT-GII COG3464 AlpA Feature: gene Location: 21840-22031 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21897-22008 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21 897-22008 bp Feature: gene Location: 22102-22428 bp Feature: domain Description: GIIM Note: maturase Location: 22129-22351 bp Feature: domain Description: GIIM Note: maturase Location: 221 29-22351 bp Feature: gene Location: 22537-23334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22738-23329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22738-23329 bp Feature: gene Location: 23804-24307 bp Feature: domain Description: COG3464 Location: 23921-24293 bp Feature: domain Description: COG3464 Location: 23921 -24293 bp Feature: gene Location: 24492-24728 bp Feature: domain Description: AlpA Location: 24516-24711 bp Feature: domain Description: AlpA Location: 2451 6-2471 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388), RVT-GII, COG3464 (Transposase ), AlpA (COG3311)

Seq: JWZC01000030.1 (45566 bp)
Overview 1 RT 1: 27304-30734 bp Neighborhood of RT #1 [27304, 30808] ArgR RVT-GII GIIM CdiI_3 Ntox28 Feature: gene Location: 27304-27783 bp Feature: domain Description: ArgR Location: 27337-27769 bp Feature: domain Description: ArgR Location: 2 7337-2 7769 bp Feature: gene Location: 28021-28239 bp Feature: gene Location: 28489-29301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28498-28948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8498-2 8948 bp Feature: domain Description: GIIM Note: maturase Location: 28999-29164 bp Feature: domain Description: GIIM Note: maturase Location: 2 8999-2 9164 bp Feature: gene Location: 30228-30614 bp Feature: domain Description: CdiI_3 Location: 30252-30528 bp Feature: domain Description: CdiI_3 Location: 302 52 -3052 8 bp Feature: gene Location: 30611-30808 bp Feature: domain Description: Ntox28 Location: 30617-30734 bp Feature: domain Description: Ntox2 8 Location: 30617-30734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArgR (COG1438), RVT-GII, GIIM (pfam08388), CdiI_3 (pfam18616), Ntox28 (pfam15605)