myRT

myRT report for GCA_000819355.1_Escherichia_coli_CVM_N33574PS_v1.0

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Seq: JWZQ01000071.1 (109442 bp)
Overview 1 RT 1: 15063-21437 bp Neighborhood of RT #1 [15063, 21460] Psu PRK09678 RVT-UG3 RVT-UG8 PBP2_CrgA_like_5 XdhC Feature: gene Location: 15063-15614 bp Ori: KIH20113.1 Feature: domain Description: Psu Location: 15084-15594 bp Feature: domain Description: Psu Location: 1 5084-1 5594 bp Feature: gene Location: 15620-15892 bp Ori: KIH20114.1 Feature: domain Description: PRK09678 Location: 15629-15794 bp Feature: domain Description: PRK09678 Location: 1 5629-1 5794 bp Feature: gene Location: 16287-17564 bp Ori: KIH20115.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 16575-17070 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 6575-1 7070 bp Feature: gene Location: 17555-19573 bp Ori: KIH20116.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 18128-18581 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 81 28-1 8581 bp Feature: gene Location: 20115-20525 bp Ori: KIH20117.1 Feature: domain Description: PBP2_CrgA_like_5 Location: 20187-20499 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 201 87-20499 bp Feature: gene Location: 20504-21460 bp Ori: KIH20118.1 Feature: domain Description: XdhC Location: 20582-21437 bp Feature: domain Description: XdhC Location: 20582-21 437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PBP2_CrgA_like_5 (cd08474), XdhC (COG1975)

Seq: JWZQ01000030.1 (4128 bp)
Overview 1 RT 1: 970-4128 bp Neighborhood of RT #1 [970, 4128] Rop CspC RVT-Retrons Feature: gene Location: 970-1164 bp Ori: KIH24075.1 Feature: domain Description: Rop Location: 973-1141 bp Feature: domain Description: Rop Location: 973-1141 bp Feature: gene Location: 2002-2205 bp Ori: KIH24076.1 Feature: domain Description: CspC Location: 2005-2200 bp Feature: domain Description: CspC Location: 2 005-2 2 00 bp Feature: gene Location: 2210-3349 bp Ori: KIH24077.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2354-2909 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 354-2 909 bp Feature: gene Location: 3923-4128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rop (pfam01815), CspC (COG1278), RVT-Retrons