myRT

myRT report for GCA_000819885.1_PRJEB7030

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Seq: CDBO01000031.1 Aeromonas fluvialis genome assembly PRJEB7030, contig F334_contig60, whole genome shotgun sequence (9181 bp)
Overview 1 RT 1: 3-5570 bp Neighborhood of RT #1 [3, 5599] RVT-UG4 TPR TPR TPR Sulfotransfer_3 TPR TolC Feature: gene Location: 3-470 bp Feature: gene Location: 553-1626 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 946-1384 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 946-1 384 bp Feature: gene Location: 1641-4316 bp Feature: domain Description: TPR Location: 1962-2259 bp Feature: domain Description: TPR Location: 1 962-2259 bp Feature: domain Description: TPR Location: 2310-2541 bp Feature: domain Description: TPR Location: 231 0-2541 bp Feature: domain Description: TPR Location: 2565-2838 bp Feature: domain Description: TPR Location: 2565-2838 bp Feature: domain Description: Sulfotransfer_3 Location: 3186-3783 bp Feature: domain Description: Sulfotransfer_3 Location: 31 86-3783 bp Feature: domain Description: TPR Location: 3984-4236 bp Feature: domain Description: TPR Location: 3984-4236 bp Feature: gene Location: 4310-5599 bp Feature: domain Description: TolC Location: 4406-5570 bp Feature: domain Description: TolC Location: 4406-5570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, TPR (smart00028), Sulfotransfer_3 (pfam13469), TolC (COG1538)

Seq: CDBO01000068.1 Aeromonas fluvialis genome assembly PRJEB7030, contig F334_contig36, whole genome shotgun sequence (193928 bp)
Overview 1 RT 1: 32701-39329 bp Neighborhood of RT #1 [32701, 39331] symport_actP PRK15064 RVT-GII PRK10788 PRK10664 Feature: gene Location: 32701-34368 bp Feature: domain Description: symport_actP Location: 32749-34366 bp Feature: domain Description: symport_actP Location: 32 749-34366 bp Feature: gene Location: 34558-36126 bp Feature: domain Description: PRK15064 Location: 34561-36118 bp Feature: domain Description: PRK15064 Location: 34561-36118 bp Feature: gene Location: 36192-36491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36237-36429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 37-3642 9 bp Feature: gene Location: 36995-38908 bp Feature: domain Description: PRK10788 Location: 37001-38882 bp Feature: domain Description: PRK10788 Location: 37001-38882 bp Feature: gene Location: 39059-39331 bp Feature: domain Description: PRK10664 Location: 39062-39329 bp Feature: domain Description: PRK10664 Location: 39062 -3932 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT symport_actP (TIGR02711), PRK15064 (ABC transporter ATP-binding protein; Provisional), RVT-GII, PRK10788 (periplasmic folding chaperone; Provisional), PRK10664 (DNA-binding protein HU-beta)