myRT

myRT report for GCA_000820925.2_XNW1

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Seq: LN590392.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold344, whole genome shotgun sequence (808 bp)
Overview 1 RT 1: 220-658 bp Neighborhood of RT #1 [220, 663] RVT-GII Feature: gene Location: 220-663 bp Ori: CEF31446.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226-658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226-658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LN590495.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold447, whole genome shotgun sequence (13311 bp)
Overview 1 RT 1: 1029-5217 bp Neighborhood of RT #1 [1029, 5348] RVT-GII RVT-GII T6SS_TssF Feature: gene Location: 1029-1151 bp Feature: gene Location: 1780-2022 bp Feature: gene Location: 2116-3189 bp Ori: CEF33466.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2317-2869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 317-2 869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869-3109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 869-3109 bp Feature: gene Location: 3458-3574 bp Feature: gene Location: 4338-5348 bp Ori: CEF33468.1 Feature: domain Description: T6SS_TssF Location: 4347-5217 bp Feature: domain Description: T6SS_TssF Location: 4347-52 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, T6SS_TssF (pfam05947)

Seq: LN590238.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold190, whole genome shotgun sequence (3847 bp)
Overview 1 RT 1: 663-3565 bp Neighborhood of RT #1 [663, 3591] RVT-GII Recombinase Zn_ribbon_recom Resolvase RVT-CRISPR-like Feature: gene Location: 663-1010 bp Ori: CEF29876.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855-1008 bp Feature: gene Location: 1136-2500 bp Ori: CEF29877.1 Feature: domain Description: Recombinase Location: 1286-1652 bp Feature: domain Description: Recombinase Location: 1286-1652 bp Feature: domain Description: Zn_ribbon_recom Location: 1697-1880 bp Feature: domain Description: Zn_ribbon_recom Location: 1697-1880 bp Feature: gene Location: 2379-2513 bp Feature: gene Location: 2639-2887 bp Ori: CEF29879.1 Feature: domain Description: Resolvase Location: 2651-2843 bp Feature: domain Description: Resolvase Location: 2651-2843 bp Feature: gene Location: 3031-3318 bp Feature: gene Location: 3463-3591 bp Ori: CEF29881.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3478-3565 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3 478-3 565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), Resolvase (smart00857), RVT-CRISPR

Seq: LN590324.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold276, whole genome shotgun sequence (38078 bp)
Overview 1 RT 1: 26217-29230 bp Neighborhood of RT #1 [26217, 29230] SR_Res_par PinE RVT-GII Feature: gene Location: 26217-26729 bp Ori: CEF30942.1 Feature: domain Description: SR_Res_par Location: 26274-26661 bp Feature: domain Description: SR_Res_par Location: 26274 -26661 bp Feature: gene Location: 26641-26880 bp Ori: CEF30943.1 Feature: domain Description: PinE Location: 26671-26860 bp Feature: domain Description: PinE Location: 26671-26860 bp Feature: gene Location: 26920-27225 bp Ori: CEF30944.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26983-27160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26983-27160 bp Feature: gene Location: 27700-28785 bp Feature: gene Location: 29105-29230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_Res_par (cd03767), PinE (COG1961), RVT-GII

Seq: LN590060.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold12, whole genome shotgun sequence (1563 bp)
Overview 1 RT 1: 877-1402 bp Neighborhood of RT #1 [877, 1500] RVT-GII GIIM Feature: gene Location: 877-1500 bp Ori: CEF28663.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1102 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1402 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LN590323.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold275, whole genome shotgun sequence (1822 bp)
Overview 1 RT 1: 226-1637 bp Neighborhood of RT #1 [226, 1789] PRK10635 PRK10509 RVT-GII GIIM Feature: gene Location: 226-702 bp Ori: CEF30912.1 Gene: bfr Feature: domain Description: PRK10635 Location: 229-697 bp Feature: domain Description: PRK106 35 Location: 229-6 97 bp Feature: gene Location: 778-972 bp Ori: CEF30913.1 Gene: bfd Feature: domain Description: PRK10509 Location: 781-970 bp Feature: domain Description: PRK10509 Location: 781-970 bp Feature: gene Location: 1229-1789 bp Ori: CEF30914.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235-1358 bp Feature: domain Description: GIIM Note: maturase Location: 1412-1637 bp Feature: domain Description: GIIM Note: maturase Location: 1412-16 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10635 (bacterioferritin; Provisional), PRK10509 (bacterioferritin-associated ferredoxin; Provisional), RVT-GII, GIIM (pfam08388)

Seq: LN590396.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold348, whole genome shotgun sequence (989 bp)
Overview 1 RT 1: 198-896 bp Neighborhood of RT #1 [198, 910] RVT-GII Feature: gene Location: 198-467 bp Feature: gene Location: 290-910 bp Ori: CEF31459.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LN590237.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold189, whole genome shotgun sequence (1563 bp)
Overview 1 RT 1: 877-1402 bp Neighborhood of RT #1 [877, 1500] RVT-GII GIIM Feature: gene Location: 877-1500 bp Ori: CEF29875.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 8 3-1102 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1402 bp Feature: domain Description: GIIM Note: maturase Location: 118 3-1402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LN590059.1 Xenorhabdus nematophila str. Websteri genome assembly XNW1, scaffold XNW1_3236_scaffold11, whole genome shotgun sequence (3847 bp)
Overview 1 RT 1: 663-3565 bp Neighborhood of RT #1 [663, 3591] RVT-GII Recombinase Zn_ribbon_recom Resolvase RVT-CRISPR-like Feature: gene Location: 663-1010 bp Ori: CEF28472.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855-1008 bp Feature: gene Location: 1136-2500 bp Ori: CEF28473.1 Feature: domain Description: Recombinase Location: 1286-1652 bp Feature: domain Description: Recombinase Location: 1286-1652 bp Feature: domain Description: Zn_ribbon_recom Location: 1697-1880 bp Feature: domain Description: Zn_ribbon_recom Location: 169 7-1880 bp Feature: gene Location: 2379-2513 bp Feature: gene Location: 2639-2887 bp Ori: CEF28475.1 Feature: domain Description: Resolvase Location: 2651-2843 bp Feature: domain Description: Resolvase Location: 2651-2843 bp Feature: gene Location: 3031-3318 bp Feature: gene Location: 3463-3591 bp Ori: CEF28477.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3478-3565 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3478-3565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), Resolvase (smart00857), RVT-CRISPR