myRT

myRT report for GCA_000821105.2_ASM82110v2

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Seq: LN651347.1 (1562152 bp)
Overview 1 RT 1: 445394-452661 bp 2 RT 2: 879227-884525 bp 3 RT 3: 1190097-1196327 bp Neighborhood of RT #1 [445394, 452666] recf gyrB RVT-GII PRK08942 glyS Neighborhood of RT #2 [879227, 884527] CytC552 RVT-GII GIIM COG1916 PRK10750 Neighborhood of RT #3 [1190097, 1196329] UraA RVT-GII GIIM PucL HiuH Feature: gene Location: 445394-446509 bp Feature: domain Description: recf Location: 445397-446462 bp Feature: domain Description: recf Location: 445397-446462 bp Feature: gene Location: 446506-448941 bp Feature: domain Description: gyrB Location: 446527-448939 bp Feature: domain Description: gyrB Location: 446527-448939 bp Feature: gene Location: 449031-449264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449058-449220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449058-449220 bp Feature: gene Location: 449660-450367 bp Feature: domain Description: PRK08942 Location: 449777-450311 bp Feature: domain Description: PRK08942 Location: 449777-45031 1 bp Feature: gene Location: 450600-452666 bp Feature: domain Description: glyS Location: 450612-452661 bp Feature: domain Description: glyS Location: 45061 2-452661 bp Feature: gene Location: 879227-879568 bp Feature: domain Description: CytC552 Location: 879263-879560 bp Feature: domain Description: CytC552 Location: 879263-879560 bp Feature: gene Location: 879819-880364 bp Feature: gene Location: 880183-881592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880528-881146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880528-881 1 46 bp Feature: domain Description: GIIM Note: maturase Location: 881200-881413 bp Feature: domain Description: GIIM Note: maturase Location: 881 200-881 41 3 bp Feature: gene Location: 881753-882991 bp Feature: domain Description: COG1916 Location: 881828-882974 bp Feature: domain Description: COG1 91 6 Location: 881 828-882974 bp Feature: gene Location: 883079-884527 bp Feature: domain Description: PRK10750 Location: 883082-884525 bp Feature: domain Description: PRK1 0750 Location: 883082-884525 bp Feature: gene Location: 1190097-1191560 bp Feature: domain Description: UraA Location: 1190127-1191426 bp Feature: domain Description: UraA Location: 1 1 901 27-1 1 91 426 bp Feature: gene Location: 1191876-1192271 bp Feature: gene Location: 1194096-1195076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1194102-1194639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 941 02-1 1 94639 bp Feature: domain Description: GIIM Note: maturase Location: 1194696-1194909 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 94696-1 1 94909 bp Feature: gene Location: 1195234-1195758 bp Feature: domain Description: PucL Location: 1195258-1195747 bp Feature: domain Description: PucL Location: 1 1 95258-1 1 95747 bp Feature: gene Location: 1195976-1196329 bp Feature: domain Description: HiuH Location: 1195982-1196327 bp Feature: domain Description: HiuH Location: 1 1 95982-1 1 96327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recf (TIGR00611), gyrB (TIGR01059), RVT-GII, PRK08942 (D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase), glyS (TIGR00211), CytC552 (COG4654), GIIM (pfam08388), COG1916 (Pheromone shutdown protein TraB, contains GTxH motif (function unknown) ), PRK10750 (Trk system potassium transporter TrkH), UraA (COG2233)
PucL (COG3195), HiuH (COG2351)

Seq: LN651348.1 (2572158 bp)
Overview 1 RT 1: 1017031-1022459 bp 2 RT 2: 1235723-1240239 bp Neighborhood of RT #1 [1017031, 1022587] RVT-GII GIIM PRK01250 PTC1 STKc_PknB_like Neighborhood of RT #2 [1235723, 1240277] dcd RVT-GII GIIM purN PurM Feature: gene Location: 1017031-1019112 bp Feature: gene Location: 1017399-1018982 bp Feature: gene Location: 1017529-1020000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018936-1019554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018936-1019554 bp Feature: domain Description: GIIM Note: maturase Location: 1019608-1019821 bp Feature: domain Description: GIIM Note: maturase Location: 1019608-101982 1 bp Feature: gene Location: 1020106-1020636 bp Feature: domain Description: PRK01250 Location: 1020109-1020631 bp Feature: domain Description: PRK012 50 Location: 102 0109-102 0631 bp Feature: gene Location: 1020803-1022587 bp Feature: domain Description: PTC1 Location: 1021175-1021517 bp Feature: domain Description: PTC1 Location: 102 1175-102 1517 bp Feature: domain Description: STKc_PknB_like Location: 1021682-1022459 bp Feature: domain Description: STKc_PknB_like Location: 102 1682 -102 2 459 bp Feature: gene Location: 1235723-1236289 bp Feature: domain Description: dcd Location: 1235732-1236284 bp Feature: domain Description: dcd Location: 12 35732 -12 362 84 bp Feature: gene Location: 1236439-1236984 bp Feature: gene Location: 1236803-1238212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237148-1237766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 37148-12 37766 bp Feature: domain Description: GIIM Note: maturase Location: 1237820-1238033 bp Feature: domain Description: GIIM Note: maturase Location: 12 3782 0-12 38033 bp Feature: gene Location: 1238467-1239207 bp Feature: domain Description: purN Location: 1238536-1239121 bp Feature: domain Description: purN Location: 12 38536-12 3912 1 bp Feature: gene Location: 1239204-1240277 bp Feature: domain Description: PurM Location: 1239240-1240239 bp Feature: domain Description: PurM Location: 12 392 40-12 402 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK01250 (inorganic diphosphatase), PTC1 (COG0631), STKc_PknB_like (cd14014), dcd (PRK00416), purN (PRK05647), PurM (COG0150)