myRT

myRT report for GCA_000821625.1_18PV

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Seq: CCFX01000090.1 (2286 bp)
Overview 1 RT 1: 34-2285 bp Neighborhood of RT #1 [34, 2285] RVT-GII GIIM Feature: gene Location: 34-1557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-1039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-1 039 bp Feature: domain Description: GIIM Note: maturase Location: 1114-1312 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 4-1 31 2 bp Feature: gene Location: 1851-2285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CCFX01000057.1 (12145 bp)
Overview 1 RT 1: 7646-10940 bp Neighborhood of RT #1 [7646, 10954] RVT-GII PRK10276 Feature: gene Location: 7646-7861 bp Feature: gene Location: 8128-8706 bp Feature: gene Location: 8592-10124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8994-9732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8994-9732 bp Feature: gene Location: 10178-10411 bp Feature: gene Location: 10529-10954 bp Feature: domain Description: PRK10276 Location: 10532-10940 bp Feature: domain Description: PRK102 76 Location: 10532 -10940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CCFX01000091.1 (9046 bp)
Overview 1 RT 1: 4403-8990 bp Neighborhood of RT #1 [4403, 9043] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 4403-5674 bp Feature: domain Description: umuC Location: 4406-5666 bp Feature: domain Description: umuC Location: 4406-5666 bp Feature: gene Location: 5674-6486 bp Feature: domain Description: PRK10276 Location: 6106-6469 bp Feature: domain Description: PRK10276 Location: 6106-6469 bp Feature: gene Location: 6511-7998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6916-7606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6916-7606 bp Feature: gene Location: 8067-8336 bp Feature: gene Location: 8468-9043 bp Feature: domain Description: ArdC Location: 8594-8990 bp Feature: domain Description: ArdC Location: 8594-8990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: CCFX01000023.1 (392441 bp)
Overview 1 RT 1: 113003-119871 bp Neighborhood of RT #1 [113003, 119873] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 113003-113731 bp Feature: domain Description: FimC Location: 113051-113714 bp Feature: domain Description: FimC Location: 113051-113714 bp Feature: gene Location: 113763-116372 bp Feature: domain Description: FimD Location: 113820-116361 bp Feature: domain Description: FimD Location: 113820-116361 bp Feature: gene Location: 116372-118450 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116780-117224 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116780-117224 bp Feature: gene Location: 118507-118947 bp Feature: domain Description: Integrase_1 Location: 118513-118729 bp Feature: domain Description: Integrase_1 Location: 118513-118729 bp Feature: gene Location: 119208-119873 bp Feature: domain Description: INT_P4_C Location: 119313-119871 bp Feature: domain Description: INT_P4 _C Location: 119313-119871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)