myRT

myRT report for GCA_000821665.1_20PV

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Seq: CCFZ01000200.1 (1615 bp)
Overview 1 RT 1: 19-1114 bp Neighborhood of RT #1 [19, 1506] RVT-GII Feature: gene Location: 19-1506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-1 1 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CCFZ01000056.1 (16429 bp)
Overview 1 RT 1: 6623-10312 bp Neighborhood of RT #1 [6623, 10335] PRK09413 PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 6623-6913 bp Feature: domain Description: PRK09413 Location: 6626-6908 bp Feature: domain Description: PRK09413 Location: 662 6-6908 bp Feature: gene Location: 7066-7206 bp Feature: domain Description: PHA02517 Location: 7075-7141 bp Feature: domain Description: PHA02 517 Location: 7075-7141 bp Feature: gene Location: 7798-9321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8071-8803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8071-8803 bp Feature: domain Description: GIIM Note: maturase Location: 8917-9076 bp Feature: domain Description: GIIM Note: maturase Location: 8917-9076 bp Feature: gene Location: 9408-9875 bp Feature: gene Location: 9877-10335 bp Feature: domain Description: Tra5 Location: 9889-10312 bp Feature: domain Description: Tra5 Location: 9889-10312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: CCFZ01000184.1 (5999 bp)
Overview 1 RT 1: 3-4275 bp Neighborhood of RT #1 [3, 4391] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 3-218 bp Feature: domain Description: InsE Location: 12-207 bp Feature: domain Description: InsE Location: 12-207 bp Feature: gene Location: 245-670 bp Feature: domain Description: PHA02517 Location: 269-605 bp Feature: domain Description: PHA02517 Location: 269-605 bp Feature: gene Location: 1262-2785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1535-2267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 5-2267 bp Feature: domain Description: GIIM Note: maturase Location: 2342-2540 bp Feature: domain Description: GIIM Note: maturase Location: 23 42-2540 bp Feature: gene Location: 2950-3108 bp Feature: domain Description: PHA02517 Location: 2953-3073 bp Feature: domain Description: PHA02517 Location: 2953 -3 073 bp Feature: gene Location: 3327-4391 bp Feature: domain Description: COG3547 Location: 3366-4275 bp Feature: domain Description: COG3 547 Location: 3 3 66-4275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)