myRT

myRT report for GCA_000821905.1_32AVR

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Seq: CCGJ01000024.1 (40127 bp)
Overview 1 RT 1: 28463-38171 bp Neighborhood of RT #1 [28463, 38191] AAA_13 AAA_13 COG0610 RVT-Retrons AAA_15 AAA_15 COG2958 Feature: gene Location: 28463-29641 bp Feature: domain Description: AAA_13 Location: 28556-28730 bp Feature: domain Description: AAA_1 3 Location: 28556-28730 bp Feature: domain Description: AAA_13 Location: 28952-29525 bp Feature: domain Description: AAA_1 3 Location: 28952-29525 bp Feature: gene Location: 29634-32753 bp Feature: domain Description: COG0610 Location: 29718-32730 bp Feature: domain Description: COG061 0 Location: 2971 8-32730 bp Feature: gene Location: 33295-34395 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33436-34000 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33436-34000 bp Feature: gene Location: 34568-36709 bp Feature: domain Description: AAA_15 Location: 34595-35012 bp Feature: domain Description: AAA_1 5 Location: 34595-3501 2 bp Feature: domain Description: AAA_15 Location: 35150-35576 bp Feature: domain Description: AAA_1 5 Location: 351 50-35576 bp Feature: gene Location: 37259-38191 bp Feature: domain Description: COG2958 Location: 37277-38171 bp Feature: domain Description: COG2958 Location: 37277-381 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, AAA_15 (pfam13175), COG2958 (Uncharacterized protein )

Seq: CCGJ01000040.1 (14883 bp)
Overview 1 RT 1: 4859-8129 bp Neighborhood of RT #1 [4859, 8143] RVT-GII PRK10276 Feature: gene Location: 4859-5074 bp Feature: gene Location: 5341-5571 bp Feature: gene Location: 5805-7316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6210-6924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 10-692 4 bp Feature: gene Location: 7367-7600 bp Feature: gene Location: 7718-8143 bp Feature: domain Description: PRK10276 Location: 7721-8129 bp Feature: domain Description: PRK102 76 Location: 772 1-812 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)