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myRT report for GCA_000821925.1_34AVR
Download annotations/find similar RTs
Seq:
CCGL01000015.1 (143349 bp)
Overview
1
RT 1: 135786-142654 bp
Neighborhood of RT #1 [135786, 142656]
FimC
FimD
RVT-UG4
Integrase_1
INT_P4_C
Feature: gene
Location: 135786-136514 bp
Feature: domain
Description: FimC
Location: 135819-136497 bp
Feature: domain
Description: FimC
Location: 1 3581 9-1 36497 bp
Feature: gene
Location: 136546-139155 bp
Feature: domain
Description: FimD
Location: 136603-139144 bp
Feature: domain
Description: FimD
Location: 1 36603-1 391 44 bp
Feature: gene
Location: 139155-141233 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 139563-140007 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 1 39563-1 40007 bp
Feature: gene
Location: 141290-141730 bp
Feature: domain
Description: Integrase_1
Location: 141296-141512 bp
Feature: domain
Description: Integrase_1
Location: 1 41 296-1 41 51 2 bp
Feature: gene
Location: 141991-142656 bp
Feature: domain
Description: INT_P4_C
Location: 142096-142654 bp
Feature: domain
Description: INT_P4_C
Location: 1 42096-1 42654 bp
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Associated domains:
myRT
FimC (COG3121)
,
FimD (COG3188)
,
RVT-UG4
,
Integrase_1 (pfam12835)
,
INT_P4_C (cd00801)