myRT

myRT report for GCA_000822405.1_62BG

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Seq: CCHJ01000210.1 (11838 bp)
Overview 1 RT 1: 4532-9415 bp Neighborhood of RT #1 [4532, 9417] PRK15110 PRK09951 RVT-UG11 umuC Feature: gene Location: 4532-5497 bp Feature: domain Description: PRK15110 Location: 4535-5495 bp Feature: domain Description: PRK1 51 1 0 Location: 4535-5495 bp Feature: gene Location: 5702-6370 bp Feature: domain Description: PRK09951 Location: 5705-6368 bp Feature: domain Description: PRK09951 Location: 5705-6368 bp Feature: gene Location: 6571-7479 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 6844-7300 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 6844-7300 bp Feature: gene Location: 7739-7996 bp Feature: gene Location: 8152-9417 bp Feature: domain Description: umuC Location: 8155-9415 bp Feature: domain Description: umuC Location: 81 55-941 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: CCHJ01000300.1 (31438 bp)
Overview 1 RT 1: 16564-21006 bp Neighborhood of RT #1 [16564, 21008] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 16564-17835 bp Feature: domain Description: umuC Location: 16567-17827 bp Feature: domain Description: umuC Location: 16567-1782 7 bp Feature: gene Location: 17835-18518 bp Feature: domain Description: PRK10276 Location: 18138-18501 bp Feature: domain Description: PRK102 76 Location: 18138-18501 bp Feature: gene Location: 18672-20159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19077-19767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19077-19767 bp Feature: gene Location: 20311-20586 bp Feature: domain Description: InsA Location: 20314-20578 bp Feature: domain Description: InsA Location: 2 0314-2 0578 bp Feature: gene Location: 20631-21008 bp Feature: domain Description: DDE_Tnp_IS1 Location: 20634-21006 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 0634-2 1006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: CCHJ01000002.1 (45429 bp)
Overview 1 RT 1: 28085-30420 bp Neighborhood of RT #1 [28085, 30420] RVT-Retrons Feature: gene Location: 28085-28279 bp Feature: gene Location: 28278-28709 bp Feature: gene Location: 28848-29798 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29028-29571 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29028-29571 bp Feature: gene Location: 29886-30086 bp Feature: gene Location: 30121-30420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons