myRT

myRT report for GCA_000823105.1_99SGR

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Seq: CCIQ01000212.1 (3971 bp)
Overview 1 RT 1: 199-3243 bp Neighborhood of RT #1 [199, 3308] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 199-603 bp Feature: domain Description: PHA02517 Location: 202-592 bp Feature: domain Description: PHA0251 7 Location: 202-592 bp Feature: gene Location: 768-2291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041-1773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 -1 773 bp Feature: domain Description: GIIM Note: maturase Location: 1848-2046 bp Feature: domain Description: GIIM Note: maturase Location: 1 848-2046 bp Feature: gene Location: 2245-2670 bp Feature: gene Location: 2883-3308 bp Feature: domain Description: PHA02517 Location: 2907-3243 bp Feature: domain Description: PHA0251 7 Location: 2907-3243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CCIQ01000218.1 (2693 bp)
Overview 1 RT 1: 1-2642 bp Neighborhood of RT #1 [1, 2642] PRK10276 RVT-GII Feature: gene Location: 1-663 bp Feature: domain Description: PRK10276 Location: 304-664 bp Feature: domain Description: PRK102 76 Location: 304-664 bp Feature: gene Location: 817-2304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1222-1912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 2 -1912 bp Feature: gene Location: 2373-2642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CCIQ01000112.1 (2733 bp)
Overview 1 RT 1: 1-1707 bp Neighborhood of RT #1 [1, 2732] FimD RVT-UG4 Feature: gene Location: 1-855 bp Feature: domain Description: FimD Location: 4-844 bp Feature: domain Description: FimD Location: 4-844 bp Feature: gene Location: 855-2732 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1263-1707 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1263 -1707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RVT-UG4

Seq: CCIQ01000206.1 (1718 bp)
Overview 1 RT 1: 1-1715 bp Neighborhood of RT #1 [1, 1715] RVT-GII Feature: gene Location: 1-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 03-114 1 bp Feature: gene Location: 1506-1715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII