myRT

myRT report for GCA_000823885.1_HO92620872

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Seq: CCZY01000004.1 Legionella pneumophila genome assembly HO92620872, contig NODE_4_length_268258_cov_54.185780, whole genome shotgun sequence (268336 bp)
Overview 1 RT 1: 49419-54324 bp Neighborhood of RT #1 [49419, 54872] conj_TOL_TraD RVT-Retrons Trypsin_2 Phage_int_SAM_2 Feature: gene Location: 49419-49748 bp Feature: gene Location: 49745-51679 bp Feature: domain Description: conj_TOL_TraD Location: 49763-51671 bp Feature: domain Description: conj_TOL_TraD Location: 49763-51 671 bp Feature: gene Location: 51861-53486 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51990-52593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 990-52593 bp Feature: domain Description: Trypsin_2 Location: 52977-53397 bp Feature: domain Description: Trypsin_2 Location: 52977-53397 bp Feature: gene Location: 53815-54042 bp Feature: gene Location: 54063-54872 bp Feature: domain Description: Phage_int_SAM_2 Location: 54117-54324 bp Feature: domain Description: Phage_int_SAM_2 Location: 541 1 7-54324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_TOL_TraD (TIGR03754), RVT-Retrons, Trypsin_2 (pfam13365), Phage_int_SAM_2 (pfam12834)

Seq: CCZY01000021.1 Legionella pneumophila genome assembly HO92620872, contig NODE_22_length_567768_cov_56.329784, whole genome shotgun sequence (567846 bp)
Overview 1 RT 1: 521270-525071 bp Neighborhood of RT #1 [521270, 525073] PRK09890 RVT_N RVT-GII GIIM cold AcAcCoA_reduct Feature: gene Location: 521270-521707 bp Feature: gene Location: 521819-521986 bp Feature: domain Description: PRK09890 Location: 521822-521906 bp Feature: domain Description: PRK09890 Location: 52 182 2 -52 1906 bp Feature: gene Location: 522472-524022 bp Feature: RT Description: RVT_N Location: 522529-522772 bp Feature: RT Description: RVT_N Location: 52 2 52 9-52 2 772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522817-523444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 2 817-52 3444 bp Feature: domain Description: GIIM Note: maturase Location: 523495-523729 bp Feature: domain Description: GIIM Note: maturase Location: 52 3495-52 372 9 bp Feature: gene Location: 524065-524250 bp Feature: domain Description: cold Location: 524098-524242 bp Feature: domain Description: cold Location: 52 4098-52 42 42 bp Feature: gene Location: 524330-525073 bp Feature: domain Description: AcAcCoA_reduct Location: 524342-525071 bp Feature: domain Description: AcAcCoA_reduct Location: 52 4342 -52 5071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09890 (cold shock protein CspG; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cold (LOAD_cold), AcAcCoA_reduct (TIGR01829)