myRT

myRT report for GCA_000824745.1_ORS3356-Illumina

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Seq: CCMZ01000028.1 Mesorhizobium plurifarium genome assembly ORS3356-Illumina, contig MPL3356_Contig_34, whole genome shotgun sequence (163388 bp)
Overview 1 RT 1: 159422-163001 bp Neighborhood of RT #1 [159422, 163366] soxB GlxA RVT-GII Feature: gene Location: 159422-160672 bp Ori: CDX21169.1 Gene: soxB Feature: domain Description: soxB Location: 159428-160640 bp Feature: domain Description: soxB Location: 1 59428-1 60640 bp Feature: gene Location: 160930-161877 bp Ori: CDX21172.1 Gene: cdhR Feature: domain Description: GlxA Location: 160993-161863 bp Feature: domain Description: GlxA Location: 1 60993-1 61 863 bp Feature: gene Location: 161957-163366 bp Ori: CDX21174.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162311-163001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6231 1 -1 63001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT soxB (TIGR01373), GlxA (COG4977), RVT-GII

Seq: CCMZ01000044.1 Mesorhizobium plurifarium genome assembly ORS3356-Illumina, contig MPL3356_Contig_49, whole genome shotgun sequence (65907 bp)
Overview 1 RT 1: 55703-61760 bp Neighborhood of RT #1 [55703, 62137] RVT-GII PinE Zn_ribbon_recom RVT-GII PRK06526 COG4584 Feature: gene Location: 55703-56146 bp Feature: gene Location: 55751-55942 bp Feature: gene Location: 56553-57125 bp Ori: CDX25044.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56880-57120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56880-5712 0 bp Feature: gene Location: 57137-57448 bp Feature: gene Location: 57303-59363 bp Ori: CDX25048.1 Feature: domain Description: PinE Location: 57348-57936 bp Feature: domain Description: PinE Location: 57348-57936 bp Feature: domain Description: Zn_ribbon_recom Location: 58311-58479 bp Feature: domain Description: Zn_ribbon_recom Location: 58311-58479 bp Feature: gene Location: 59519-59944 bp Feature: gene Location: 59812-60168 bp Ori: CDX25052.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59857-60016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59857-60016 bp Feature: gene Location: 60201-60977 bp Ori: CDX25055.1 Feature: domain Description: PRK06526 Location: 60246-60912 bp Feature: domain Description: PRK0652 6 Location: 602 46-60912 bp Feature: gene Location: 60977-62137 bp Ori: CDX25057.1 Feature: domain Description: COG4584 Location: 61232-61760 bp Feature: domain Description: COG4584 Location: 612 32 -61760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), PRK06526 (transposase; Provisional), COG4584 (Transposase )