myRT

myRT report for GCA_000825785.2_B50

Download annotations/find similar RTs

Seq: CDMA01000001.1 Ralstonia solanacearum genome assembly B50, scaffold RALB5v1, whole genome shotgun sequence (5596066 bp)
Overview 1 RT 1: 3123846-3131402 bp 2 RT 2: 4205646-4209991 bp 3 RT 3: 5203421-5210936 bp 4 RT 4: 5249511-5253606 bp Neighborhood of RT #1 [3123846, 3131404] PRK09692 RVT_N RVT-GII GIIM SurA FhaC Neighborhood of RT #2 [4205646, 4211559] RVT_N RVT-GII GIIM RadC ParB_N_like Neighborhood of RT #3 [5203421, 5210936] thiamin_ThiO BetA BetA RVT-GII AIPR Neighborhood of RT #4 [5249511, 5253606] RVT-GII GIIM Feature: gene Location: 3123846-3124430 bp Feature: gene Location: 3124639-3125847 bp Feature: domain Description: PRK09692 Location: 3124687-3125797 bp Feature: domain Description: PRK09692 Location: 31 24687-31 25797 bp Feature: gene Location: 3126034-3128178 bp Feature: RT Description: RVT_N Location: 3126088-3126331 bp Feature: RT Description: RVT_N Location: 31 26088-31 26331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3126376-3127015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 26376-31 2701 5 bp Feature: domain Description: GIIM Note: maturase Location: 3127066-3127300 bp Feature: domain Description: GIIM Note: maturase Location: 31 27066-31 27300 bp Feature: gene Location: 3128799-3129635 bp Feature: domain Description: SurA Location: 3128892-3129585 bp Feature: domain Description: SurA Location: 31 28892-31 29585 bp Feature: gene Location: 3129653-3131404 bp Feature: domain Description: FhaC Location: 3129674-3131402 bp Feature: domain Description: FhaC Location: 31 29674-31 31 402 bp Feature: gene Location: 4205646-4206122 bp Feature: gene Location: 4206200-4206544 bp Feature: gene Location: 4206641-4207987 bp Feature: RT Description: RVT_N Location: 4206722-4206959 bp Feature: RT Description: RVT_N Location: 4206722-4206959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4207010-4207652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420701 0-4207652 bp Feature: domain Description: GIIM Note: maturase Location: 4207703-4207925 bp Feature: domain Description: GIIM Note: maturase Location: 4207703-4207925 bp Feature: gene Location: 4208710-4209216 bp Feature: domain Description: RadC Location: 4208746-4209214 bp Feature: domain Description: RadC Location: 4208746-420921 4 bp Feature: gene Location: 4209388-4211559 bp Feature: domain Description: ParB_N_like Location: 4209730-4209991 bp Feature: domain Description: ParB_N_like Location: 4209730-4209991 bp Feature: gene Location: 5203421-5204293 bp Feature: domain Description: thiamin_ThiO Location: 5203427-5204189 bp Feature: domain Description: thiamin_ThiO Location: 5203427-52041 89 bp Feature: gene Location: 5204611-5207250 bp Feature: domain Description: BetA Location: 5204638-5206081 bp Feature: domain Description: BetA Location: 5204638-5206081 bp Feature: domain Description: BetA Location: 5206090-5206261 bp Feature: domain Description: BetA Location: 5206090-5206261 bp Feature: gene Location: 5207382-5208692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5207571-5208261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5207571 -5208261 bp Feature: gene Location: 5209412-5210272 bp Feature: domain Description: AIPR Location: 5209415-5210006 bp Feature: domain Description: AIPR Location: 520941 5-521 0006 bp Feature: gene Location: 5210577-5210936 bp Feature: gene Location: 5249511-5250269 bp Feature: gene Location: 5250298-5251050 bp Feature: gene Location: 5251696-5252955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5251921-5252536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5251 921 -5252536 bp Feature: domain Description: GIIM Note: maturase Location: 5252596-5252794 bp Feature: domain Description: GIIM Note: maturase Location: 5252596-5252794 bp Feature: gene Location: 5252932-5253216 bp Feature: gene Location: 5253466-5253606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SurA (COG0760), FhaC (COG2831), RadC (pfam04002), ParB_N_like (cd16411), thiamin_ThiO (TIGR02352), BetA (COG2303)
AIPR (pfam10592)