myRT

myRT report for GCA_000829535.1_ASM82953v1

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Seq: JXLP01000011.1 Bacillus badius strain MTCC 1458 Contig11, whole genome shotgun sequence (175732 bp)
Overview 1 RT 1: 88698-96077 bp Neighborhood of RT #1 [88698, 96085] PRK00148 RadC RVT-GII Intron_maturas2 RVT-GII Intron_maturas2 PRK00024 PRK13927 Feature: gene Location: 88698-89285 bp Feature: domain Description: PRK00148 Location: 88704-89265 bp Feature: domain Description: PRK001 48 Location: 88704-89265 bp Feature: gene Location: 89307-89804 bp Feature: domain Description: RadC Location: 89331-89799 bp Feature: domain Description: RadC Location: 89331 -89799 bp Feature: gene Location: 90402-91934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90666-91473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90666-91 473 bp Feature: domain Description: Intron_maturas2 Location: 91551-91842 bp Feature: domain Description: Intron_maturas2 Location: 91 551 -91 842 bp Feature: gene Location: 91956-92099 bp Feature: gene Location: 92835-94577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93102-93939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 02-93939 bp Feature: domain Description: Intron_maturas2 Location: 94035-94305 bp Feature: domain Description: Intron_maturas2 Location: 94035-94305 bp Feature: gene Location: 94760-94936 bp Feature: domain Description: PRK00024 Location: 94799-94931 bp Feature: domain Description: PRK00024 Location: 94799-94931 bp Feature: gene Location: 95069-96085 bp Feature: domain Description: PRK13927 Location: 95078-96077 bp Feature: domain Description: PRK1 3927 Location: 95078-96077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00148 (Maf-like protein; Reviewed), RadC (pfam04002), RVT-GII, Intron_maturas2 (pfam01348), PRK00024 (DNA repair protein RadC), PRK13927 (rod shape-determining protein MreB; Provisional)

Seq: JXLP01000015.1 Bacillus badius strain MTCC 1458 Contig15, whole genome shotgun sequence (119933 bp)
Overview 1 RT 1: 18527-26200 bp Neighborhood of RT #1 [18527, 26205] PcrB pcrA RVT-GII HNHc pcrA ligA Feature: gene Location: 18527-19219 bp Feature: domain Description: PcrB Location: 18533-19205 bp Feature: domain Description: PcrB Location: 18533-192 05 bp Feature: gene Location: 19255-19953 bp Feature: domain Description: pcrA Location: 19279-19939 bp Feature: domain Description: pcrA Location: 192 79-19939 bp Feature: gene Location: 20684-22564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21011-21746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1011-2 1746 bp Feature: domain Description: HNHc Note: nucleases Location: 22340-22439 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 340-2 2 439 bp Feature: gene Location: 22676-24178 bp Feature: domain Description: pcrA Location: 22679-24170 bp Feature: domain Description: pcrA Location: 2 2 679-2 4170 bp Feature: gene Location: 24196-26205 bp Feature: domain Description: ligA Location: 24208-26200 bp Feature: domain Description: ligA Location: 2 42 08-2 62 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PcrB (pfam01884), pcrA (TIGR01073), RVT-GII, HNHc (smart00507), ligA (PRK14351)