myRT

myRT report for GCA_000829635.1_ASM82963v1

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Seq: BBLB01000128.1 Vibrio owensii DNA, scaffold: scaffold2193_cov70, strain: 051011B, whole genome shotgun sequence (1907 bp)
Overview 1 RT 1: 32-1310 bp Neighborhood of RT #1 [32, 1534] RVT_N RVT-GII GIIM Feature: gene Location: 32-1534 bp Feature: domain Description: RVT_N Location: 110-353 bp Feature: domain Description: RVT_N Location: 1 1 0-353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1 025 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1310 bp Feature: domain Description: GIIM Note: maturase Location: 1 085-1 31 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: BBLB01000084.1 Vibrio owensii DNA, scaffold: scaffold1151_cov34, strain: 051011B, whole genome shotgun sequence (322575 bp)
Overview 1 RT 1: 158174-165588 bp Neighborhood of RT #1 [158174, 165588] SR_Res_par HTH_Hin_like RVT-UG15 Feature: gene Location: 158174-158380 bp Feature: gene Location: 158543-159166 bp Feature: domain Description: SR_Res_par Location: 158552-158990 bp Feature: domain Description: SR_Res_par Location: 158552 -158990 bp Feature: domain Description: HTH_Hin_like Location: 159026-159152 bp Feature: domain Description: HTH_Hin_like Location: 15902 6-159152 bp Feature: gene Location: 159222-160823 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 159633-160035 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 159633-160035 bp Feature: gene Location: 160981-162021 bp Feature: gene Location: 162253-165588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_Res_par (cd03767), HTH_Hin_like (cd00569), RVT-UG15

Seq: BBLB01000027.1 Vibrio owensii DNA, scaffold: scaffold196_cov35, strain: 051011B, whole genome shotgun sequence (196614 bp)
Overview 1 RT 1: 177603-182417 bp Neighborhood of RT #1 [177603, 182417] RVT-Retrons Feature: gene Location: 177603-178103 bp Feature: gene Location: 178096-178842 bp Feature: gene Location: 178994-179959 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 179225-179765 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 179225-179765 bp Feature: gene Location: 180056-181759 bp Feature: gene Location: 182247-182417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons