myRT

myRT report for GCA_000830505.1_ASM83050v1

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Seq: JXOK01000068.1 Vibrio mytili strain CAIM 528 contig00087, whole genome shotgun sequence (72558 bp)
Overview 1 RT 1: 20047-25057 bp Neighborhood of RT #1 [20047, 25071] HTH_17 RVT-GII GIIM Gly-zipper_Omp Feature: gene Location: 20047-20226 bp Feature: domain Description: HTH_17 Location: 20059-20203 bp Feature: domain Description: HTH_1 7 Location: 20059-20203 bp Feature: gene Location: 21578-22885 bp Feature: gene Location: 22980-24290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23196-23808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 96-23808 bp Feature: domain Description: GIIM Note: maturase Location: 23862-24087 bp Feature: domain Description: GIIM Note: maturase Location: 23862-24087 bp Feature: gene Location: 24874-25071 bp Feature: domain Description: Gly-zipper_Omp Location: 24961-25057 bp Feature: domain Description: Gly-zipper_Omp Location: 24961 -25057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), Gly-zipper_Omp (pfam13488)

Seq: JXOK01000006.1 Vibrio mytili strain CAIM 528 contig00006, whole genome shotgun sequence (187818 bp)
Overview 1 RT 1: 84181-89455 bp Neighborhood of RT #1 [84181, 89463] RVT-GII PRK03202 PTS_IIB_ascorbate Feature: gene Location: 84181-84834 bp Feature: gene Location: 85816-86166 bp Feature: gene Location: 87528-87833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87615-87687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87615-87687 bp Feature: gene Location: 88171-89151 bp Feature: domain Description: PRK03202 Location: 88174-89143 bp Feature: domain Description: PRK032 02 Location: 88174-89143 bp Feature: gene Location: 89176-89463 bp Feature: domain Description: PTS_IIB_ascorbate Location: 89185-89455 bp Feature: domain Description: PTS_IIB_ascorbate Location: 89185-89455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK03202 (ATP-dependent 6-phosphofructokinase), PTS_IIB_ascorbate (cd05563)

Seq: JXOK01000005.1 Vibrio mytili strain CAIM 528 contig00005, whole genome shotgun sequence (54310 bp)
Overview 1 RT 1: 43107-49320 bp Neighborhood of RT #1 [43107, 49544] TraU PRK14876 PRK14876 PRK14876 RVT_N RVT-GII GIIM Feature: gene Location: 43107-44135 bp Feature: domain Description: TraU Location: 43236-44124 bp Feature: domain Description: TraU Location: 43 23 6-44124 bp Feature: gene Location: 44138-47830 bp Feature: domain Description: PRK14876 Location: 44150-45521 bp Feature: domain Description: PRK14876 Location: 44150-45521 bp Feature: domain Description: PRK14876 Location: 45545-45659 bp Feature: domain Description: PRK14876 Location: 45545-45659 bp Feature: domain Description: PRK14876 Location: 46406-47819 bp Feature: domain Description: PRK14876 Location: 46406-47819 bp Feature: gene Location: 48072-49544 bp Feature: RT Description: RVT_N Location: 48120-48360 bp Feature: RT Description: RVT_N Location: 48120-483 60 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48408-49035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48408-4903 5 bp Feature: domain Description: GIIM Note: maturase Location: 49095-49320 bp Feature: domain Description: GIIM Note: maturase Location: 49095-493 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraU (pfam06834), PRK14876 (conjugal transfer mating pair stabilization protein TraN; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)