myRT

myRT report for GCA_000832075.1_OUH308042_1.0

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Seq: JPIU01000040.1 Sanguibacteroides justesenii strain OUH 308042 contig46, whole genome shotgun sequence (483400 bp)
Overview 1 RT 1: 31659-39726 bp 2 RT 2: 122871-132333 bp Neighborhood of RT #1 [31659, 39726] HATPase_c_3 TraG-D_C RVT-GII Intron_maturas2 HNHc Relaxase Neighborhood of RT #2 [122871, 132333] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 31659-33551 bp Feature: domain Description: HATPase_c_3 Location: 31713-32019 bp Feature: domain Description: HATPase_c_3 Location: 31 71 3-3201 9 bp Feature: gene Location: 33592-34596 bp Feature: domain Description: TraG-D_C Location: 33970-34303 bp Feature: domain Description: TraG-D_C Location: 33970-34303 bp Feature: gene Location: 34560-36377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34827-35649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34827-35649 bp Feature: domain Description: Intron_maturas2 Location: 35793-36027 bp Feature: domain Description: Intron_maturas2 Location: 35793-36027 bp Feature: domain Description: HNHc Note: nucleases Location: 36198-36348 bp Feature: domain Description: HNHc Note: nucleases Location: 361 98-36348 bp Feature: gene Location: 38084-39319 bp Feature: domain Description: Relaxase Location: 38273-38864 bp Feature: domain Description: Relaxase Location: 38273-38864 bp Feature: gene Location: 39304-39726 bp Feature: gene Location: 122871-129608 bp Feature: domain Description: Laminin_G_3 Location: 124332-124410 bp Feature: domain Description: Laminin_G_3 Location: 1 24332-1 2441 0 bp Feature: domain Description: Laminin_G_3 Location: 125061-125487 bp Feature: domain Description: Laminin_G_3 Location: 1 25061 -1 25487 bp Feature: gene Location: 129605-129799 bp Feature: gene Location: 130125-131429 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 130335-131013 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 30335-1 31 01 3 bp Feature: gene Location: 131426-131911 bp Feature: gene Location: 132091-132333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase_c_3 (pfam13589), TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Relaxase (pfam03432), Laminin_G_3 (pfam13385), RVT-DGRs