myRT

myRT report for GCA_000836095.1_ASM83609v1

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Seq: BBSQ01000070.1 Acinetobacter lwoffii DNA, contig: ALW03_CON00070, strain: NBRC 109760, whole genome shotgun sequence (4968 bp)
Overview 1 RT 1: 502-4397 bp Neighborhood of RT #1 [502, 4417] HMA HMA CzcD PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 502-1794 bp Feature: domain Description: HMA Location: 793-964 bp Feature: domain Description: HMA Location: 793-964 bp Feature: domain Description: HMA Location: 1021-1198 bp Feature: domain Description: HMA Location: 1 021 -1 1 98 bp Feature: domain Description: CzcD Location: 1255-1783 bp Feature: domain Description: CzcD Location: 1 255-1 783 bp Feature: gene Location: 1921-2418 bp Feature: domain Description: PHA02517 Location: 1948-2398 bp Feature: domain Description: PHA0251 7 Location: 1 948-2398 bp Feature: gene Location: 2471-3712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2669-3326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2669-3326 bp Feature: domain Description: GIIM Note: maturase Location: 3404-3635 bp Feature: domain Description: GIIM Note: maturase Location: 3404-3635 bp Feature: gene Location: 3719-3883 bp Feature: gene Location: 4205-4417 bp Feature: domain Description: PHA02517 Location: 4226-4397 bp Feature: domain Description: PHA0251 7 Location: 4226-4397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), CzcD (COG1230), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BBSQ01000001.1 Acinetobacter lwoffii DNA, contig: ALW03_CON00001, strain: NBRC 109760, whole genome shotgun sequence (151659 bp)
Overview 1 RT 1: 66685-75529 bp Neighborhood of RT #1 [66685, 75529] HsdM RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like RVT-UG5 PRK07209 Feature: gene Location: 66685-68160 bp Feature: domain Description: HsdM Location: 66691-68152 bp Feature: domain Description: HsdM Location: 66691-68152 bp Feature: gene Location: 68167-70593 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 68536-69031 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 68536-69031 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 69331-69898 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 69331-69898 bp Feature: gene Location: 70609-73851 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 71140-71632 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 71140-71632 bp Feature: gene Location: 73976-75259 bp Feature: domain Description: PRK07209 Location: 73988-75257 bp Feature: domain Description: PRK072 09 Location: 73988-752 57 bp Feature: gene Location: 75401-75529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_SonII-TRD2-CR2_like (cd17246), RVT-UG5, PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated)