myRT

myRT report for GCA_000836715.1_ASM83671v1

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Seq: JXIS01000081.1 Bacillus sp. L_1B0_5 Contig81, whole genome shotgun sequence (27641 bp)
Overview 1 RT 1: 1052-7286 bp Neighborhood of RT #1 [1052, 7384] AAA_21 SLATT_5 RVT-UG17 Nmad3 COG3440 Feature: gene Location: 1052-2293 bp Ori: KIQ82957.1 Feature: domain Description: AAA_21 Location: 1151-1985 bp Feature: domain Description: AAA_21 Location: 1 1 51 -1 985 bp Feature: gene Location: 2620-3207 bp Ori: KIQ82958.1 Feature: domain Description: SLATT_5 Location: 2653-3187 bp Feature: domain Description: SLATT_5 Location: 2653-31 87 bp Feature: gene Location: 3217-4587 bp Ori: KIQ82959.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3445-4030 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3445-4030 bp Feature: gene Location: 4767-4868 bp Feature: gene Location: 6449-7384 bp Ori: KIQ82961.1 Feature: domain Description: Nmad3 Location: 6506-6785 bp Feature: domain Description: Nmad3 Location: 6506-6785 bp Feature: domain Description: COG3440 Location: 7037-7286 bp Feature: domain Description: COG3440 Location: 7037-7286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), SLATT_5 (pfam18160), RVT-UG17, Nmad3 (pfam18754), COG3440 (Predicted restriction endonuclease )

Seq: JXIS01000107.1 Bacillus sp. L_1B0_5 Contig107, whole genome shotgun sequence (18043 bp)
Overview 1 RT 1: 446-8365 bp Neighborhood of RT #1 [446, 8382] YdiL RVT-GII HNHc CwlT_like Feature: gene Location: 446-1129 bp Ori: KIQ80158.1 Feature: domain Description: YdiL Location: 464-1115 bp Feature: domain Description: YdiL Location: 464-1115 bp Feature: gene Location: 2898-3473 bp Feature: gene Location: 4659-6455 bp Ori: KIQ80160.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4917-5622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4917-562 2 bp Feature: domain Description: HNHc Note: nucleases Location: 6183-6318 bp Feature: domain Description: HNHc Note: nucleases Location: 6183-6318 bp Feature: gene Location: 6767-6985 bp Feature: gene Location: 7228-8382 bp Ori: KIQ80162.1 Feature: domain Description: CwlT_like Location: 8080-8365 bp Feature: domain Description: CwlT_like Location: 8080-8365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdiL (COG1266), RVT-GII, HNHc (smart00507), CwlT_like

Seq: JXIS01000025.1 Bacillus sp. L_1B0_5 Contig25, whole genome shotgun sequence (251473 bp)
Overview 1 RT 1: 132130-139532 bp Neighborhood of RT #1 [132130, 139555] PRK09284 RVT-GII PRK10420 DUF4870 Feature: gene Location: 132130-133890 bp Ori: KIQ89012.1 Feature: domain Description: PRK09284 Location: 132148-133888 bp Feature: domain Description: PRK09284 Location: 13 2148-13 3 888 bp Feature: gene Location: 135060-135362 bp Feature: gene Location: 136849-137079 bp Ori: KIQ89014.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136897-137017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 6897-13 7017 bp Feature: gene Location: 137280-138941 bp Ori: KIQ89015.1 Feature: domain Description: PRK10420 Location: 137283-138939 bp Feature: domain Description: PRK10420 Location: 13 7283 -13 893 9 bp Feature: gene Location: 139238-139555 bp Ori: KIQ89016.1 Feature: domain Description: DUF4870 Location: 139256-139532 bp Feature: domain Description: DUF4870 Location: 13 9256-13 953 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09284 (thiamine biosynthesis protein ThiC; Provisional), RVT-GII, PRK10420 (L-lactate permease; Provisional), DUF4870 (pfam09685)

Seq: JXIS01000114.1 Bacillus sp. L_1B0_5 Contig114, whole genome shotgun sequence (10747 bp)
Overview 1 RT 1: 156-5240 bp Neighborhood of RT #1 [156, 6676] RVT-GII Intron_maturas2 HNHc TrbL TrbL Feature: gene Location: 156-1988 bp Ori: KIQ79781.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 26-1257 bp Feature: domain Description: Intron_maturas2 Location: 1323-1701 bp Feature: domain Description: Intron_maturas2 Location: 1323-1701 bp Feature: domain Description: HNHc Note: nucleases Location: 1767-1932 bp Feature: domain Description: HNHc Note: nucleases Location: 1767-1932 bp Feature: gene Location: 3501-3899 bp Feature: gene Location: 3956-6676 bp Ori: KIQ79783.1 Feature: domain Description: TrbL Location: 4463-4718 bp Feature: domain Description: TrbL Location: 4 4 63-4 718 bp Feature: domain Description: TrbL Location: 4859-5240 bp Feature: domain Description: TrbL Location: 4 859-524 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TrbL (pfam04610)