myRT

myRT report for GCA_000836745.1_ASM83674v1

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Seq: JXIT01000065.1 Bacillus sp. L_1B0_8 contig_70, whole genome shotgun sequence (27650 bp)
Overview 1 RT 1: 20267-26291 bp Neighborhood of RT #1 [20267, 26599] Nmad3 COG3440 RVT-UG17 SLATT_5 AAA_21 Feature: gene Location: 20267-21202 bp Ori: KIQ85045.1 Feature: domain Description: Nmad3 Location: 20324-20603 bp Feature: domain Description: Nmad3 Location: 20324-20603 bp Feature: domain Description: COG3440 Location: 20855-21104 bp Feature: domain Description: COG3440 Location: 20855-21 1 04 bp Feature: gene Location: 22783-22884 bp Feature: gene Location: 23064-24434 bp Ori: KIQ85047.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 23292-23877 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 23292-23877 bp Feature: gene Location: 24444-25031 bp Ori: KIQ85048.1 Feature: domain Description: SLATT_5 Location: 24477-25011 bp Feature: domain Description: SLATT_5 Location: 24477-2501 1 bp Feature: gene Location: 25358-26599 bp Ori: KIQ85049.1 Feature: domain Description: AAA_21 Location: 25457-26291 bp Feature: domain Description: AAA_21 Location: 25457-26291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nmad3 (pfam18754), COG3440 (Predicted restriction endonuclease ), RVT-UG17, SLATT_5 (pfam18160), AAA_21 (pfam13304)

Seq: JXIT01000055.1 Bacillus sp. L_1B0_8 contig_58, whole genome shotgun sequence (7162 bp)
Overview 1 RT 1: 487-6951 bp Neighborhood of RT #1 [487, 7007] TrbL TrbL RVT-GII Intron_maturas2 HNHc Feature: gene Location: 487-3207 bp Ori: KIQ85804.1 Feature: domain Description: TrbL Location: 994-1249 bp Feature: domain Description: TrbL Location: 994-12 49 bp Feature: domain Description: TrbL Location: 1390-1771 bp Feature: domain Description: TrbL Location: 1390-1771 bp Feature: gene Location: 3264-3662 bp Feature: gene Location: 5175-7007 bp Ori: KIQ85806.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5445-6276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5445-62 76 bp Feature: domain Description: Intron_maturas2 Location: 6342-6720 bp Feature: domain Description: Intron_maturas2 Location: 6342 -672 0 bp Feature: domain Description: HNHc Note: nucleases Location: 6786-6951 bp Feature: domain Description: HNHc Note: nucleases Location: 6786-6951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JXIT01000111.1 Bacillus sp. L_1B0_8 contig_117, whole genome shotgun sequence (18043 bp)
Overview 1 RT 1: 446-8365 bp Neighborhood of RT #1 [446, 8382] YdiL RVT-GII HNHc CwlT_like Feature: gene Location: 446-1129 bp Ori: KIQ80038.1 Feature: domain Description: YdiL Location: 464-1115 bp Feature: domain Description: YdiL Location: 464-1115 bp Feature: gene Location: 2898-3473 bp Feature: gene Location: 4659-6455 bp Ori: KIQ80040.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4917-5622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4917-5622 bp Feature: domain Description: HNHc Note: nucleases Location: 6183-6318 bp Feature: domain Description: HNHc Note: nucleases Location: 6183 -63 18 bp Feature: gene Location: 6767-6985 bp Feature: gene Location: 7228-8382 bp Ori: KIQ80042.1 Feature: domain Description: CwlT_like Location: 8080-8365 bp Feature: domain Description: CwlT_like Location: 8080-83 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdiL (COG1266), RVT-GII, HNHc (smart00507), CwlT_like

Seq: JXIT01000003.1 Bacillus sp. L_1B0_8 contig_3, whole genome shotgun sequence (251551 bp)
Overview 1 RT 1: 111997-119420 bp Neighborhood of RT #1 [111997, 119422] DUF4870 PRK10420 RVT-GII PRK09284 Feature: gene Location: 111997-112314 bp Ori: KIQ92686.1 Feature: domain Description: DUF4870 Location: 112015-112291 bp Feature: domain Description: DUF4 870 Location: 112015-112291 bp Feature: gene Location: 112611-114272 bp Ori: KIQ92687.1 Feature: domain Description: PRK10420 Location: 112614-114270 bp Feature: domain Description: PRK104 20 Location: 112614 -114 270 bp Feature: gene Location: 114473-114703 bp Ori: KIQ92688.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114521-114641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114 521-114 64 1 bp Feature: gene Location: 116190-116492 bp Feature: gene Location: 117662-119422 bp Ori: KIQ92690.1 Feature: domain Description: PRK09284 Location: 117680-119420 bp Feature: domain Description: PRK09284 Location: 117680-1194 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4870 (pfam09685), PRK10420 (L-lactate permease; Provisional), RVT-GII, PRK09284 (thiamine biosynthesis protein ThiC; Provisional)