myRT

myRT report for GCA_000876215.1_ASM87621v1

Download annotations/find similar RTs

Seq: JAUE01000051.1 Streptococcus equi subsp. zooepidemicus Sz4is contig000033, whole genome shotgun sequence (51816 bp)
Overview 1 RT 1: 11015-21314 bp 2 RT 2: 36125-41509 bp Neighborhood of RT #1 [11015, 21314] RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Neighborhood of RT #2 [36125, 41509] TraG-D_C RVT-GII T4SS-DNA_transf Feature: gene Location: 11015-11314 bp Feature: gene Location: 11385-12296 bp Feature: gene Location: 12437-14248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12701-13523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2701 -1 3523 bp Feature: domain Description: Intron_maturas2 Location: 13592-14066 bp Feature: domain Description: Intron_maturas2 Location: 1 3592-1 4066 bp Feature: domain Description: HNHc Note: nucleases Location: 14066-14231 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4066-1 4231 bp Feature: gene Location: 14813-20713 bp Feature: domain Description: N6_Mtase Location: 16823-17414 bp Feature: domain Description: N6_Mtase Location: 1 6823-1 741 4 bp Feature: domain Description: COG4646 Location: 18005-20309 bp Feature: domain Description: COG4646 Location: 1 8005-20309 bp Feature: gene Location: 20763-21314 bp Feature: gene Location: 36125-36367 bp Feature: gene Location: 36385-37002 bp Feature: domain Description: TraG-D_C Location: 36463-36790 bp Feature: domain Description: TraG-D_C Location: 36463-36790 bp Feature: gene Location: 37028-38938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37337-38093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37337-38093 bp Feature: gene Location: 39690-41021 bp Feature: domain Description: T4SS-DNA_transf Location: 40077-40965 bp Feature: domain Description: T4SS-DNA_transf Location: 40077-40965 bp Feature: gene Location: 41021-41509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), TraG-D_C (pfam12696), T4SS-DNA_transf (pfam02534)