myRT

myRT report for GCA_000876275.1_ASM87627v1

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Seq: JATY01000068.1 Streptococcus equi subsp. zooepidemicus SzAM35 contig000074, whole genome shotgun sequence (2503 bp)
Overview 1 RT 1: 126-1593 bp Neighborhood of RT #1 [126, 1928] RVT-GII Intron_maturas2 Feature: gene Location: 126-1928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1 206 bp Feature: domain Description: Intron_maturas2 Location: 1290-1593 bp Feature: domain Description: Intron_maturas2 Location: 1 290-1 593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: JATY01000100.1 Streptococcus equi subsp. zooepidemicus SzAM35 contig000031, whole genome shotgun sequence (50237 bp)
Overview 1 RT 1: 10919-21213 bp 2 RT 2: 29687-37377 bp Neighborhood of RT #1 [10919, 21213] KOG1000 RVT-GII Intron_maturas2 N6_Mtase COG4646 Neighborhood of RT #2 [29687, 37460] Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type RVT_N RVT-GII GIIM VirB4_CagE PrgI Feature: gene Location: 10919-11218 bp Feature: gene Location: 11288-12259 bp Feature: domain Description: KOG1000 Location: 11315-11510 bp Feature: domain Description: KOG1000 Location: 11315-11510 bp Feature: gene Location: 12340-14151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12604-13426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 604-1342 6 bp Feature: domain Description: Intron_maturas2 Location: 13495-13972 bp Feature: domain Description: Intron_maturas2 Location: 13495-13972 bp Feature: gene Location: 14715-20612 bp Feature: domain Description: N6_Mtase Location: 16719-17319 bp Feature: domain Description: N6_Mtase Location: 16719-17319 bp Feature: domain Description: COG4646 Location: 17901-20208 bp Feature: domain Description: COG4646 Location: 17901-2 02 08 bp Feature: gene Location: 20662-21213 bp Feature: gene Location: 29687-32491 bp Feature: domain Description: Peptidase_M23 Location: 31133-31337 bp Feature: domain Description: Peptidase_M2 3 Location: 31133-31337 bp Feature: domain Description: Phage_lysozyme2 Location: 31490-32000 bp Feature: domain Description: Phage_lysozyme2 Location: 31490-32 000 bp Feature: domain Description: PRK08581 Location: 32117-32450 bp Feature: domain Description: PRK08581 Location: 32 117-32 450 bp Feature: gene Location: 32488-33513 bp Feature: domain Description: TraC-F-type Location: 32638-33334 bp Feature: domain Description: TraC-F-type Location: 32 638-33334 bp Feature: gene Location: 33461-35134 bp Feature: RT Description: RVT_N Location: 33533-33773 bp Feature: RT Description: RVT_N Location: 33533-33773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33821-34481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3382 1-34481 bp Feature: domain Description: GIIM Note: maturase Location: 34550-34769 bp Feature: domain Description: GIIM Note: maturase Location: 34550-34769 bp Feature: gene Location: 35663-37150 bp Feature: domain Description: VirB4_CagE Location: 36239-36878 bp Feature: domain Description: VirB4_CagE Location: 362 39-36878 bp Feature: gene Location: 37107-37460 bp Feature: domain Description: PrgI Location: 37119-37377 bp Feature: domain Description: PrgI Location: 37119-37377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746), RVT_N (pfam13655)
GIIM (pfam08388), VirB4_CagE (TIGR00929), PrgI (pfam12666)