myRT

myRT report for GCA_000876295.1_ASM87629v1

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Seq: JATW01000067.1 Streptococcus equi subsp. zooepidemicus Sz16 contig000017, whole genome shotgun sequence (71772 bp)
Overview 1 RT 1: 10935-20620 bp 2 RT 2: 29709-37399 bp Neighborhood of RT #1 [10935, 20634] KOG1000 RVT-GII Intron_maturas2 SF2_C_SNF N6_Mtase COG4646 Neighborhood of RT #2 [29709, 37482] Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type RVT_N RVT-GII GIIM VirB4_CagE PrgI Feature: gene Location: 10935-11234 bp Feature: gene Location: 11304-12275 bp Feature: domain Description: KOG1000 Location: 11331-11526 bp Feature: domain Description: KOG1 000 Location: 1 1 331 -1 1 526 bp Feature: gene Location: 12356-14167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12620-13442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2620-1 3442 bp Feature: domain Description: Intron_maturas2 Location: 13511-13988 bp Feature: domain Description: Intron_maturas2 Location: 1 351 1 -1 3988 bp Feature: gene Location: 14731-15378 bp Feature: domain Description: SF2_C_SNF Location: 15202-15346 bp Feature: domain Description: SF2_C_SNF Location: 1 5202-1 5346 bp Feature: gene Location: 15424-20634 bp Feature: domain Description: N6_Mtase Location: 17434-18043 bp Feature: domain Description: N6_Mtase Location: 1 7434-1 8043 bp Feature: domain Description: COG4646 Location: 18616-20620 bp Feature: domain Description: COG4646 Location: 1 861 6-20620 bp Feature: gene Location: 29709-32513 bp Feature: domain Description: Peptidase_M23 Location: 31155-31359 bp Feature: domain Description: Peptidase_M23 Location: 31 1 55-31 359 bp Feature: domain Description: Phage_lysozyme2 Location: 31512-32022 bp Feature: domain Description: Phage_lysozyme2 Location: 31 51 2-32022 bp Feature: domain Description: PRK08581 Location: 32139-32472 bp Feature: domain Description: PRK08581 Location: 321 39-32472 bp Feature: gene Location: 32510-33535 bp Feature: domain Description: TraC-F-type Location: 32660-33356 bp Feature: domain Description: TraC-F-type Location: 32660-33356 bp Feature: gene Location: 33483-35156 bp Feature: RT Description: RVT_N Location: 33555-33795 bp Feature: RT Description: RVT_N Location: 33555-33795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33843-34503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33843-34503 bp Feature: domain Description: GIIM Note: maturase Location: 34572-34791 bp Feature: domain Description: GIIM Note: maturase Location: 34572-34791 bp Feature: gene Location: 35685-37172 bp Feature: domain Description: VirB4_CagE Location: 36261-36900 bp Feature: domain Description: VirB4_CagE Location: 36261 -36900 bp Feature: gene Location: 37129-37482 bp Feature: domain Description: PrgI Location: 37141-37399 bp Feature: domain Description: PrgI Location: 371 41 -37399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), SF2_C_SNF (cd18793), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746)
RVT_N (pfam13655), GIIM (pfam08388), VirB4_CagE (TIGR00929), PrgI (pfam12666)

Seq: JATW01000046.1 Streptococcus equi subsp. zooepidemicus Sz16 contig000087, whole genome shotgun sequence (2500 bp)
Overview 1 RT 1: 123-1590 bp Neighborhood of RT #1 [123, 1925] RVT-GII Intron_maturas2 Feature: gene Location: 123-1925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-12 03 bp Feature: domain Description: Intron_maturas2 Location: 1287-1590 bp Feature: domain Description: Intron_maturas2 Location: 12 87-1590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)