myRT

myRT report for GCA_000876495.2_ASM87649v2

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Seq: JXSU01000010.1 (250014 bp)
Overview 1 RT 1: 66565-69198 bp Neighborhood of RT #1 [66565, 69290] RVT-GII HNHc Feature: gene Location: 66565-66837 bp Feature: gene Location: 67027-67224 bp Feature: gene Location: 67416-69290 bp Ori: KIS21595.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67734-68430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67734-68430 bp Feature: domain Description: HNHc Note: nucleases Location: 69033-69198 bp Feature: domain Description: HNHc Note: nucleases Location: 69033-691 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JXSU01000007.1 (2916972 bp)
Overview 1 RT 1: 461977-468720 bp Neighborhood of RT #1 [461977, 468740] RVT-UNC Tyw1 RVT-GII RVT_N HNHc 2A0309 RimL Feature: gene Location: 461977-462684 bp Ori: KIS22832.1 Feature: domain Description: RVT-UNC Note: UNC RT Location: 461980-462661 bp Feature: domain Description: RVT-UNC Note: UNC RT Location: 461980-462 661 bp Feature: gene Location: 462703-463392 bp Ori: KIS24957.1 Feature: domain Description: Tyw1 Location: 462763-463312 bp Feature: domain Description: Tyw1 Location: 462 763-463312 bp Feature: gene Location: 464496-466304 bp Ori: KIS22833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464814-465510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464814-465510 bp Feature: domain Description: RVT_N Location: 465567-465678 bp Feature: domain Description: RVT_N Location: 465567-465678 bp Feature: domain Description: HNHc Note: nucleases Location: 466101-466185 bp Feature: domain Description: HNHc Note: nucleases Location: 466101-466185 bp Feature: gene Location: 466605-467687 bp Ori: KIS22834.1 Feature: domain Description: 2A0309 Location: 466629-467682 bp Feature: domain Description: 2 A0309 Location: 46662 9-467682 bp Feature: gene Location: 468165-468740 bp Ori: KIS22835.1 Feature: domain Description: RimL Location: 468180-468720 bp Feature: domain Description: RimL Location: 468180-46872 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B3/B4(RVT-UNC), Tyw1 (COG0731), RVT-GII, RVT_N (pfam13655), HNHc (smart00507), 2A0309 (TIGR00912), RimL (COG1670)

Seq: JXSU01000008.1 (537306 bp)
Overview 1 RT 1: 371074-375381 bp Neighborhood of RT #1 [371074, 375386] SAM_DCase_Bsu COG1568 RVT-CRISPR-like Mor PRK14453 Feature: gene Location: 371074-371424 bp Ori: KIS22257.1 Feature: domain Description: SAM_DCase_Bsu Location: 371083-371413 bp Feature: domain Description: SAM_DCase_Bsu Location: 3 71083 -3 71413 bp Feature: gene Location: 371578-372774 bp Ori: KIS22258.1 Feature: domain Description: COG1568 Location: 371632-372511 bp Feature: domain Description: COG1568 Location: 3 7163 2-3 72511 bp Feature: gene Location: 373143-373343 bp Ori: KIS22259.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 373188-373335 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3 73 188-3 73 3 3 5 bp Feature: gene Location: 373497-373772 bp Ori: KIS22260.1 Feature: domain Description: Mor Location: 373530-373761 bp Feature: domain Description: Mor Location: 3 73 53 0-3 73 761 bp Feature: gene Location: 374352-375386 bp Ori: KIS22261.1 Feature: domain Description: PRK14453 Location: 374358-375381 bp Feature: domain Description: PRK14453 Location: 3 743 58-3 753 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SAM_DCase_Bsu (TIGR03330), COG1568 (Predicted methyltransferase ), RVT-CRISPR, Mor (pfam08765), PRK14453 (chloramphenicol/florfenicol resistance protein; Provisional)