myRT

myRT report for GCA_000876955.1_Velvet_assembly

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Seq: CEAU01000147.1 Streptococcus suis genome assembly Velvet_assembly, contig NODE_261_length_91171_cov_33.827370, whole genome shotgun sequence (91241 bp)
Overview 1 RT 1: 35140-44862 bp Neighborhood of RT #1 [35140, 44862] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 35140-36555 bp Feature: gene Location: 36559-41064 bp Feature: domain Description: N6_Mtase Location: 37174-37765 bp Feature: domain Description: N6_Mtase Location: 371 74-37765 bp Feature: domain Description: COG4646 Location: 38356-40660 bp Feature: domain Description: COG4646 Location: 38356-40660 bp Feature: gene Location: 41629-43440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41893-42715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 893-4271 5 bp Feature: domain Description: Intron_maturas2 Location: 42784-43258 bp Feature: domain Description: Intron_maturas2 Location: 42784-43258 bp Feature: domain Description: HNHc Note: nucleases Location: 43258-43423 bp Feature: domain Description: HNHc Note: nucleases Location: 43258-43423 bp Feature: gene Location: 43581-44492 bp Feature: gene Location: 44563-44862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)