myRT

myRT report for GCA_000934745.1_ASM93474v1

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Seq: JYNO01000004.1 Desulfonatronum thioautotrophicum strain ASO4-1 LZ09DRAFT_scaffold00003.3_C, whole genome shotgun sequence (466323 bp)
Overview 1 RT 1: 240455-245015 bp 2 RT 2: 421656-427690 bp Neighborhood of RT #1 [240455, 245335] couple_hipB HipA RVT-GII rve HTH_32 rve Neighborhood of RT #2 [421656, 427690] RVT-GII GIIM caiC Feature: gene Location: 240455-240676 bp Feature: domain Description: couple_hipB Location: 240485-240653 bp Feature: domain Description: couple_hipB Location: 240485-240653 bp Feature: gene Location: 240693-241118 bp Feature: domain Description: HipA Location: 240702-240966 bp Feature: domain Description: HipA Location: 240702-240966 bp Feature: gene Location: 241403-242401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241952-242378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 952-242378 bp Feature: gene Location: 242429-243988 bp Feature: domain Description: rve Location: 242858-243194 bp Feature: domain Description: rve Location: 242858-2431 94 bp Feature: gene Location: 244274-245335 bp Feature: domain Description: HTH_32 Location: 244385-244601 bp Feature: domain Description: HTH_32 Location: 244385-244601 bp Feature: domain Description: rve Location: 244673-245015 bp Feature: domain Description: rve Location: 244673-24501 5 bp Feature: gene Location: 421656-421826 bp Feature: gene Location: 423047-424960 bp Feature: gene Location: 423605-425011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424031-424655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424031 -424655 bp Feature: domain Description: GIIM Note: maturase Location: 424697-424889 bp Feature: domain Description: GIIM Note: maturase Location: 424697-424889 bp Feature: gene Location: 425274-425447 bp Feature: domain Description: caiC Location: 425280-425442 bp Feature: domain Description: caiC Location: 425280-425442 bp Feature: gene Location: 425516-427690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT couple_hipB (TIGR03070), HipA (COG3550), RVT-GII, rve (pfam00665), HTH_32 (pfam13565), GIIM (pfam08388), caiC (PRK08008)

Seq: JYNO01000013.1 Desulfonatronum thioautotrophicum strain ASO4-1 LZ09DRAFT_scaffold00009.9_C, whole genome shotgun sequence (135879 bp)
Overview 1 RT 1: 88-5174 bp Neighborhood of RT #1 [88, 5419] DUF2442 RVT-GII NeuB_NnaB UbiG Feature: gene Location: 88-324 bp Feature: domain Description: DUF2442 Location: 100-310 bp Feature: domain Description: DUF2 442 Location: 100-310 bp Feature: gene Location: 555-1967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 897-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 897-1587 bp Feature: gene Location: 3029-4057 bp Feature: domain Description: NeuB_NnaB Location: 3059-4019 bp Feature: domain Description: NeuB_NnaB Location: 3059-4019 bp Feature: gene Location: 4409-5419 bp Feature: domain Description: UbiG Location: 4790-5174 bp Feature: domain Description: UbiG Location: 4790-5174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NeuB_NnaB (TIGR03569), UbiG (TIGR01983), RVT-GII, DUF2442 (pfam10387)