myRT

myRT report for GCA_000935045.1_ASM93504v1

Download annotations/find similar RTs

Seq: JYKS01000011.1 (232804 bp)
Overview 1 RT 1: 84602-92047 bp Neighborhood of RT #1 [84602, 92190] HTH_1 PBP2_DntR_like_2 TIGR04141 RVT-GII TnpB_IS66 InsE Feature: gene Location: 84602-85516 bp Ori: KIY41173.1 Feature: domain Description: HTH_1 Location: 84635-84812 bp Feature: domain Description: HTH_1 Location: 84635-8481 2 bp Feature: domain Description: PBP2_DntR_like_2 Location: 84905-85490 bp Feature: domain Description: PBP2_DntR_like_2 Location: 84905-85490 bp Feature: gene Location: 86016-87731 bp Ori: KIY41174.1 Feature: domain Description: TIGR04141 Location: 86049-87624 bp Feature: domain Description: TIGR041 41 Location: 86049-87624 bp Feature: gene Location: 88069-89865 bp Ori: KIY41175.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88783-89473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88783-89473 bp Feature: gene Location: 91535-91870 bp Ori: KIY41176.1 Feature: domain Description: TnpB_IS66 Location: 91553-91841 bp Feature: domain Description: TnpB_IS66 Location: 91 553-91 841 bp Feature: gene Location: 91867-92190 bp Ori: KIY41177.1 Feature: domain Description: InsE Location: 91873-92047 bp Feature: domain Description: InsE Location: 91 873-92047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_DntR_like_2 (cd08464), TIGR04141 (sporadically distributed protein, TIGR04141 family), RVT-GII, TnpB_IS66 (pfam05717), InsE (COG2963)

Seq: JYKS01000004.1 (394724 bp)
Overview 1 RT 1: 372535-376300 bp Neighborhood of RT #1 [372535, 376647] RVT-GII TnpB_IS66 AcrR Feature: gene Location: 372535-372960 bp Feature: gene Location: 373169-373522 bp Feature: gene Location: 374439-374741 bp Ori: KIY42362.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374643-374730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374643-374730 bp Feature: gene Location: 375147-375455 bp Ori: KIY42363.1 Feature: domain Description: TnpB_IS66 Location: 375177-375330 bp Feature: domain Description: TnpB_IS66 Location: 375177-375330 bp Feature: gene Location: 375946-376647 bp Ori: KIY42364.1 Feature: domain Description: AcrR Location: 376072-376300 bp Feature: domain Description: AcrR Location: 376072 -376300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TnpB_IS66 (pfam05717), AcrR (COG1309)

Seq: JYKS01000089.1 (24783 bp)
Overview 1 RT 1: 10339-17811 bp Neighborhood of RT #1 [10339, 17825] Aes RVT-GII GIIM FhuE cyc_pep_trnsptr Feature: gene Location: 10339-11292 bp Ori: KIY37526.1 Feature: domain Description: Aes Location: 10438-11269 bp Feature: domain Description: Aes Location: 1043 8-11269 bp Feature: gene Location: 11767-13188 bp Ori: KIY37527.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12124-12739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12124-1273 9 bp Feature: domain Description: GIIM Note: maturase Location: 12796-13015 bp Feature: domain Description: GIIM Note: maturase Location: 12796-13 015 bp Feature: gene Location: 13417-15771 bp Ori: KIY37534.1 Feature: domain Description: FhuE Location: 13684-15769 bp Feature: domain Description: FhuE Location: 13 684-15769 bp Feature: gene Location: 16176-17825 bp Ori: KIY37528.1 Feature: domain Description: cyc_pep_trnsptr Location: 16194-17811 bp Feature: domain Description: cyc_pep_trnsptr Location: 16194-17811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aes (COG0657), RVT-GII, GIIM (pfam08388), FhuE (COG4773), cyc_pep_trnsptr (TIGR01194)

Seq: JYKS01000007.1 (313087 bp)
Overview 1 RT 1: 139940-148943 bp Neighborhood of RT #1 [139940, 148981] P-type_ATPase_HM_ZosA_PfeT-like DUF2790 RVT-GII GIIM 2A0601 8a0102 Feature: gene Location: 139940-141937 bp Ori: KIY41634.1 Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 140030-141917 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 14 0030-14 1917 bp Feature: gene Location: 142139-142462 bp Ori: KIY41635.1 Feature: domain Description: DUF2790 Location: 142250-142448 bp Feature: domain Description: DUF2790 Location: 14 2250-14 24 4 8 bp Feature: gene Location: 142647-144068 bp Ori: KIY41636.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143004-143619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 3004 -14 3619 bp Feature: domain Description: GIIM Note: maturase Location: 143673-143901 bp Feature: domain Description: GIIM Note: maturase Location: 14 3673-14 3901 bp Feature: gene Location: 144545-147706 bp Ori: KIY41637.1 Feature: domain Description: 2A0601 Location: 144548-147689 bp Feature: domain Description: 2A0601 Location: 14 4 54 8-14 7689 bp Feature: gene Location: 147731-148981 bp Ori: KIY41638.1 Feature: domain Description: 8a0102 Location: 148139-148943 bp Feature: domain Description: 8a0102 Location: 14 8139-14 894 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P-type_ATPase_HM_ZosA_PfeT-like (cd07551), DUF2790 (pfam10976), RVT-GII, GIIM (pfam08388), 2A0601 (TIGR00914), 8a0102 (TIGR00999)