myRT

myRT report for GCA_000935525.1_ASM93552v1

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Seq: JYIH01000013.1 (71897 bp)
Overview 1 RT 1: 65079-71874 bp Neighborhood of RT #1 [65079, 71891] HTH_XRE PRK09692 RVT-UG5 nitrilase Psu Feature: gene Location: 65079-65543 bp Ori: KJA08152.1 Feature: domain Description: HTH_XRE Location: 65109-65277 bp Feature: domain Description: HTH_XRE Location: 651 09-65277 bp Feature: gene Location: 66221-67477 bp Ori: KJA08144.1 Feature: domain Description: PRK09692 Location: 66230-67433 bp Feature: domain Description: PRK09692 Location: 66230-67433 bp Feature: gene Location: 67570-70446 bp Ori: KJA08145.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 68044-68572 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 68044-68572 bp Feature: domain Description: nitrilase Location: 69784-70366 bp Feature: domain Description: nitrilase Location: 69784-70366 bp Feature: gene Location: 70443-71132 bp Feature: gene Location: 71334-71891 bp Ori: KJA08147.1 Feature: domain Description: Psu Location: 71352-71874 bp Feature: domain Description: Psu Location: 71 352-71 874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), Psu (pfam07455)

Seq: JYIH01000186.1 (2006 bp)
Overview 1 RT 1: 82-1714 bp Neighborhood of RT #1 [82, 1749] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 82-1749 bp Ori: KJA01515.1 Feature: domain Description: RVT_N Location: 130-367 bp Feature: domain Description: RVT_N Location: 130-367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-1060 bp Feature: domain Description: GIIM Note: maturase Location: 1111-1345 bp Feature: domain Description: GIIM Note: maturase Location: 1111-1345 bp Feature: domain Description: HNHc Note: nucleases Location: 1555-1714 bp Feature: domain Description: HNHc Note: nucleases Location: 1555-1714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JYIH01000004.1 (7904 bp)
Overview 1 RT 1: 1-2632 bp Neighborhood of RT #1 [1, 2637] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 1-159 bp Feature: gene Location: 267-1637 bp Ori: KJA08574.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 495-1101 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 495-1101 bp Feature: gene Location: 1615-2166 bp Ori: KJA08575.1 Feature: domain Description: SLATT_5 Location: 1621-2137 bp Feature: domain Description: SLATT_5 Location: 1621-213 7 bp Feature: gene Location: 2389-2637 bp Ori: KJA08576.1 Feature: domain Description: PRK10597 Location: 2392-2632 bp Feature: domain Description: PRK10597 Location: 23 92-263 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: JYIH01000096.1 (2366 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 278-703 bp Feature: gene Location: 672-2180 bp Ori: KJA05169.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)