myRT

myRT report for GCA_000935825.1_PAVEPAVT10-G1

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Seq: JYHC01000102.1 Pseudomonas avellanae strain PaVt10 PaVt10102, whole genome shotgun sequence (19653 bp)
Overview 1 RT 1: 12628-19543 bp Neighborhood of RT #1 [12628, 19545] FimA RVT-GII GIIM autotrans_barl Feature: gene Location: 12628-13749 bp Feature: domain Description: FimA Location: 13261-13747 bp Feature: domain Description: FimA Location: 1 3261 -1 3747 bp Feature: gene Location: 13787-15292 bp Feature: gene Location: 15492-16748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15684-16299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5684-1 6299 bp Feature: domain Description: GIIM Note: maturase Location: 16356-16581 bp Feature: domain Description: GIIM Note: maturase Location: 1 6356-1 6581 bp Feature: gene Location: 16753-17364 bp Feature: gene Location: 17389-19545 bp Feature: domain Description: autotrans_barl Location: 18328-19543 bp Feature: domain Description: autotrans_barl Location: 1 8328-1 9543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimA (pfam16970), RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414)

Seq: JYHC01000397.1 Pseudomonas avellanae strain PaVt10 PaVt10398, whole genome shotgun sequence (815 bp)
Overview 1 RT 1: 2-785 bp Neighborhood of RT #1 [2, 814] RVT-GII Feature: gene Location: 2-814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170-785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170-785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII