myRT

myRT report for GCA_000936325.1_Velvet_assembly

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Seq: CEJT01000012.1 Streptococcus suis genome assembly Velvet_assembly, contig NODE_14_length_12872_cov_31.823416, whole genome shotgun sequence (12926 bp)
Overview 1 RT 1: 4516-12776 bp Neighborhood of RT #1 [4516, 12814] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4516-5025 bp Feature: gene Location: 5076-10538 bp Feature: domain Description: N6_Mtase Location: 7089-7680 bp Feature: domain Description: N6_Mtase Location: 7089-7680 bp Feature: domain Description: COG4646 Location: 8271-10395 bp Feature: domain Description: COG4646 Location: 8271 -1 0395 bp Feature: gene Location: 11036-12814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11297-12089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 297-1 2089 bp Feature: domain Description: Intron_maturas2 Location: 12194-12425 bp Feature: domain Description: Intron_maturas2 Location: 1 21 94-1 2425 bp Feature: domain Description: HNHc Note: nucleases Location: 12590-12776 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2590-1 2776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )