myRT

myRT report for GCA_000936425.1_ASM93642v1

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Seq: AVFK01000067.1 Skermanella aerolata KACC 11604 strain 5416T-32 contig84, whole genome shotgun sequence (20911 bp)
Overview 1 RT 1: 507-8105 bp Neighborhood of RT #1 [507, 8146] COG3547 RVT-GII Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 507-2402 bp Feature: gene Location: 2351-3508 bp Ori: KJB90554.1 Feature: domain Description: COG3547 Location: 2546-3461 bp Feature: domain Description: COG3547 Location: 2546-3461 bp Feature: gene Location: 3982-5226 bp Ori: KJB90555.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4393-5083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4393-5083 bp Feature: gene Location: 5883-7160 bp Ori: KJB90556.1 Feature: domain Description: Phage_int_SAM_1 Location: 6288-6525 bp Feature: domain Description: Phage_int_SAM_1 Location: 6288-6525 bp Feature: domain Description: INT_RitA_C_like Location: 6606-7137 bp Feature: domain Description: INT_RitA_C_like Location: 6606-71 37 bp Feature: gene Location: 7157-8146 bp Ori: KJB90557.1 Feature: domain Description: INT_RitB_C_like Location: 7526-8105 bp Feature: domain Description: INT_RitB_C_like Location: 7526-81 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797)

Seq: AVFK01000045.1 Skermanella aerolata KACC 11604 strain 5416T-32 contig56, whole genome shotgun sequence (50787 bp)
Overview 1 RT 1: 18221-22961 bp Neighborhood of RT #1 [18221, 22961] Rve RVT-GII Feature: gene Location: 18221-19669 bp Feature: gene Location: 19840-20193 bp Ori: KJB91281.1 Feature: domain Description: Rve Location: 19972-20191 bp Feature: domain Description: Rve Location: 19972 -2 0191 bp Feature: gene Location: 20908-21534 bp Ori: KJB91282.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20917-21127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0917-2 112 7 bp Feature: gene Location: 21585-21788 bp Feature: gene Location: 21969-22961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII

Seq: AVFK01000154.1 Skermanella aerolata KACC 11604 strain 5416T-32 contig178, whole genome shotgun sequence (1586 bp)
Overview 1 RT 1: 82-1252 bp Neighborhood of RT #1 [82, 1326] RVT-GII GIIM Feature: gene Location: 82-1326 bp Ori: KJB89865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286-946 bp Feature: domain Description: GIIM Note: maturase Location: 1030-1252 bp Feature: domain Description: GIIM Note: maturase Location: 103 0-1252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)