myRT

myRT report for GCA_000937335.1_Velvet_assembly

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Seq: CEJP01000010.1 Streptococcus suis genome assembly Velvet_assembly, contig NODE_10_length_81937_cov_16.282022, whole genome shotgun sequence (82001 bp)
Overview 1 RT 1: 68566-77836 bp Neighborhood of RT #1 [68566, 77844] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF TnpV Feature: gene Location: 68566-69117 bp Feature: gene Location: 69167-74608 bp Feature: domain Description: N6_Mtase Location: 71159-71750 bp Feature: domain Description: N6_Mtase Location: 71 1 59-71 750 bp Feature: domain Description: COG4646 Location: 72341-74465 bp Feature: domain Description: COG4646 Location: 72341 -74465 bp Feature: gene Location: 75106-76884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75367-76159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75367-761 59 bp Feature: domain Description: Intron_maturas2 Location: 76264-76495 bp Feature: domain Description: Intron_maturas2 Location: 76264-76495 bp Feature: domain Description: HNHc Note: nucleases Location: 76660-76846 bp Feature: domain Description: HNHc Note: nucleases Location: 76660-76846 bp Feature: gene Location: 77022-77489 bp Feature: domain Description: SF2_C_SNF Location: 77265-77412 bp Feature: domain Description: SF2_C_SNF Location: 77265-7741 2 bp Feature: gene Location: 77470-77844 bp Feature: domain Description: TnpV Location: 77506-77836 bp Feature: domain Description: TnpV Location: 77506-77836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), TnpV (pfam14198)