myRT

myRT report for GCA_000937465.2_ASM93746v2

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Seq: JYGC02000002.1 (974843 bp)
Overview 1 RT 1: 574193-583146 bp Neighborhood of RT #1 [574193, 583199] AAA_15 AAA_15 RVT-UG5 YeeA TIGR02687 Feature: gene Location: 574193-575335 bp Ori: KJC24332.1 Feature: domain Description: AAA_15 Location: 574196-574337 bp Feature: domain Description: AAA_1 5 Location: 5741 96-574337 bp Feature: domain Description: AAA_15 Location: 575018-575129 bp Feature: domain Description: AAA_1 5 Location: 57501 8-5751 29 bp Feature: gene Location: 575335-575892 bp Feature: gene Location: 575889-578909 bp Ori: KJC24334.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 576384-576858 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 576384-576858 bp Feature: gene Location: 579755-580684 bp Ori: KJC24335.1 Feature: domain Description: YeeA Location: 579782-580547 bp Feature: domain Description: YeeA Location: 579782-580547 bp Feature: gene Location: 580692-583199 bp Ori: KJC24336.1 Feature: domain Description: TIGR02687 Location: 580707-583146 bp Feature: domain Description: TIGR02687 Location: 580707-5831 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-UG5, YeeA (COG1002), TIGR02687 (TIGR02687 family protein)

Seq: JYGC02000003.1 (665574 bp)
Overview 1 RT 1: 578621-591106 bp 2 RT 2: 607365-616215 bp Neighborhood of RT #1 [578621, 591108] IMPa_N_2 IMPa_helical Peptidase_M60 HipA_So_like RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [607365, 616244] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 578621-581347 bp Ori: KJC23624.2 Feature: domain Description: IMPa_N_2 Location: 578828-579410 bp Feature: domain Description: IMPa_N_2 Location: 57882 8-579410 bp Feature: domain Description: IMPa_helical Location: 579491-579818 bp Feature: domain Description: IMPa_helical Location: 579491-579818 bp Feature: domain Description: Peptidase_M60 Location: 580262-581192 bp Feature: domain Description: Peptidase_M60 Location: 5802 62 -581192 bp Feature: gene Location: 582024-582341 bp Ori: KJC23625.1 Feature: domain Description: HipA_So_like Location: 582063-582303 bp Feature: domain Description: HipA_So_like Location: 582 063-582 303 bp Feature: gene Location: 582645-584330 bp Ori: KJC23626.1 Feature: domain Description: RVT_N Location: 582702-582942 bp Feature: domain Description: RVT_N Location: 582 702 -582 942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582990-583626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582 990-58362 6 bp Feature: domain Description: GIIM Note: maturase Location: 583680-583911 bp Feature: domain Description: GIIM Note: maturase Location: 583680-583911 bp Feature: domain Description: HNH Note: nucleases Location: 584163-584301 bp Feature: domain Description: HNH Note: nucleases Location: 584163-584301 bp Feature: gene Location: 585411-589148 bp Ori: KJC23627.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 585519-586176 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 585519-586176 bp Feature: domain Description: PRK09776 Location: 586389-586860 bp Feature: domain Description: PRK09776 Location: 586389-586860 bp Feature: domain Description: PAS Location: 586905-587442 bp Feature: domain Description: PAS Location: 586905-587442 bp Feature: domain Description: PRK10060 Location: 587451-589098 bp Feature: domain Description: PRK10060 Location: 587451-589098 bp Feature: gene Location: 589255-591108 bp Ori: KJC23628.1 Feature: domain Description: PRK05658 Location: 589267-591106 bp Feature: domain Description: PRK05658 Location: 5892 67-591106 bp Feature: gene Location: 607365-608657 bp Ori: KJC23646.1 Feature: domain Description: PRK10770 Location: 607455-608649 bp Feature: domain Description: PRK10770 Location: 607455-608649 bp Feature: gene Location: 608638-611439 bp Ori: KJC23647.1 Feature: domain Description: LptD Location: 608833-611425 bp Feature: domain Description: LptD Location: 608833-61142 5 bp Feature: gene Location: 611572-613284 bp Ori: KJC23648.1 Feature: domain Description: RVT_N Location: 611629-611872 bp Feature: domain Description: RVT_N Location: 61162 9-611872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 611917-612553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 611917-612 553 bp Feature: domain Description: YkfC Location: 612760-612913 bp Feature: domain Description: YkfC Location: 612 760-612 913 bp Feature: domain Description: HNH Note: nucleases Location: 613090-613228 bp Feature: domain Description: HNH Note: nucleases Location: 613090-6132 2 8 bp Feature: gene Location: 614557-615573 bp Ori: KJC23649.1 Feature: domain Description: COG3178 Location: 614560-615559 bp Feature: domain Description: COG3178 Location: 614560-615559 bp Feature: gene Location: 615570-616244 bp Ori: KJC23650.1 Feature: domain Description: NTP_transferase_like_1 Location: 615576-616215 bp Feature: domain Description: NTP_transferase_like_1 Location: 615576-6162 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IMPa_N_2 (pfam18650), IMPa_helical (pfam18642), Peptidase_M60 (pfam13402), HipA_So_like (cd17809), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional)
PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)