myRT

myRT report for GCA_000937495.2_ASM93749v2

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Seq: JYGB02000002.1 Pseudomonas aeruginosa strain MRSN 17623 scaffold00002, whole genome shotgun sequence (932419 bp)
Overview 1 RT 1: 83786-94083 bp Neighborhood of RT #1 [83786, 94094] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 83786-85639 bp Feature: domain Description: PRK05658 Location: 83798-85637 bp Feature: domain Description: PRK05658 Location: 83798-85637 bp Feature: gene Location: 85746-89483 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85854-86511 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85854-8651 1 bp Feature: domain Description: PRK09776 Location: 86724-87195 bp Feature: domain Description: PRK09776 Location: 86724-871 95 bp Feature: domain Description: PAS Location: 87267-87777 bp Feature: domain Description: PAS Location: 87267-87777 bp Feature: domain Description: PRK10060 Location: 87786-89433 bp Feature: domain Description: PRK1 0060 Location: 87786-89433 bp Feature: gene Location: 90564-92249 bp Feature: RT Description: RVT_N Location: 90621-90861 bp Feature: RT Description: RVT_N Location: 90621 -90861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90909-91545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90909-91 545 bp Feature: domain Description: GIIM Note: maturase Location: 91599-91830 bp Feature: domain Description: GIIM Note: maturase Location: 91 599-91 830 bp Feature: domain Description: HNH Note: nucleases Location: 92082-92220 bp Feature: domain Description: HNH Note: nucleases Location: 92082-92220 bp Feature: gene Location: 92577-92714 bp Feature: gene Location: 92973-94094 bp Feature: domain Description: COG3177 Location: 92991-94083 bp Feature: domain Description: COG31 77 Location: 92991 -94083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )