myRT

myRT report for GCA_000937535.1_Velvet_assembly

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Seq: CEEC01000029.1 Streptococcus suis genome assembly Velvet_assembly, contig NODE_31_length_7724_cov_31.606163, whole genome shotgun sequence (7782 bp)
Overview 1 RT 1: 1-7635 bp Neighborhood of RT #1 [1, 7673] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-5397 bp Feature: domain Description: N6_Mtase Location: 1948-2539 bp Feature: domain Description: N6_Mtase Location: 1 948-2539 bp Feature: domain Description: COG4646 Location: 3130-5254 bp Feature: domain Description: COG4646 Location: 31 30-5254 bp Feature: gene Location: 5895-7673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6156-6948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 56-6948 bp Feature: domain Description: Intron_maturas2 Location: 7053-7284 bp Feature: domain Description: Intron_maturas2 Location: 7053-7284 bp Feature: domain Description: HNHc Note: nucleases Location: 7449-7635 bp Feature: domain Description: HNHc Note: nucleases Location: 7449-7635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)