myRT

myRT report for GCA_000937575.1_Ec138B_L1_MIRA_assembly

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Seq: CCCC01001559.1 (1804 bp)
Overview 1 RT 1: 149-1700 bp Neighborhood of RT #1 [149, 1708] RVT-UG17 a_cpa1 MauG Feature: gene Location: 149-721 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 164-341 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 64-341 bp Feature: domain Description: a_cpa1 Location: 392-677 bp Feature: domain Description: a_cpa1 Location: 392-677 bp Feature: gene Location: 685-981 bp Feature: gene Location: 1025-1708 bp Feature: domain Description: MauG Location: 1043-1700 bp Feature: domain Description: MauG Location: 1 043-1 700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, a_cpa1 (TIGR00831), MauG (COG1858)

Seq: CCCC01000679.1 (3874 bp)
Overview 1 RT 1: 767-3854 bp Neighborhood of RT #1 [767, 3871] MauG SLATT_5 RVT-UG17 Psu Feature: gene Location: 767-1183 bp Feature: domain Description: MauG Location: 773-1166 bp Feature: domain Description: MauG Location: 773-1166 bp Feature: gene Location: 1320-1532 bp Feature: domain Description: SLATT_5 Location: 1323-1479 bp Feature: domain Description: SLATT_5 Location: 132 3-1479 bp Feature: gene Location: 1727-3136 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1964-2576 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1964-2 576 bp Feature: gene Location: 3461-3871 bp Feature: domain Description: Psu Location: 3464-3854 bp Feature: domain Description: Psu Location: 3464-3854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MauG (COG1858), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)

Seq: CCCC01001298.1 (1057 bp)
Overview 1 RT 1: 1-1039 bp Neighborhood of RT #1 [1, 1056] PRK11569 RVT-GII Feature: gene Location: 1-444 bp Feature: domain Description: PRK11569 Location: 43-445 bp Feature: domain Description: PRK11569 Location: 43 -445 bp Feature: gene Location: 901-1056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-1039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-103 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11569 (glyoxylate bypass operon transcriptional repressor IclR), RVT-GII

Seq: CCCC01001816.1 (3098 bp)
Overview 1 RT 1: 870-2868 bp Neighborhood of RT #1 [870, 3023] PRK10682 RVT_N RVT-GII GIIM Feature: gene Location: 870-1070 bp Feature: domain Description: PRK10682 Location: 873-1059 bp Feature: domain Description: PRK10682 Location: 873-1059 bp Feature: gene Location: 1143-1325 bp Feature: gene Location: 1605-3023 bp Feature: domain Description: RVT_N Location: 1653-1890 bp Feature: domain Description: RVT_N Location: 1653-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1941-2583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194 1-2583 bp Feature: domain Description: GIIM Note: maturase Location: 2634-2868 bp Feature: domain Description: GIIM Note: maturase Location: 2634 -2868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10682 (putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CCCC01000470.1 (1922 bp)
Overview 1 RT 1: 3-1844 bp Neighborhood of RT #1 [3, 1921] PRK10594 RVT-GII Feature: gene Location: 3-1631 bp Feature: domain Description: PRK10594 Location: 6-1632 bp Feature: domain Description: PRK105 94 Location: 6-1632 bp Feature: gene Location: 1733-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1757-1844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175 7-1844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10594 (murein L,D-transpeptidase; Provisional), RVT-GII