myRT

myRT report for GCA_000939215.1_Ec57A_A7_MIRA_assembly

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Seq: CCCD01002315.1 (3803 bp)
Overview 1 RT 1: 160-3295 bp Neighborhood of RT #1 [160, 3295] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 160-606 bp Feature: domain Description: PHA02517 Location: 163-604 bp Feature: domain Description: PHA0251 7 Location: 1 63-604 bp Feature: gene Location: 723-2246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996-1728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996-1 728 bp Feature: domain Description: GIIM Note: maturase Location: 1803-2001 bp Feature: domain Description: GIIM Note: maturase Location: 1 803-2001 bp Feature: gene Location: 2838-3317 bp Feature: domain Description: PHA02517 Location: 2898-3252 bp Feature: domain Description: PHA0251 7 Location: 2898-3252 bp Feature: gene Location: 3167-3295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CCCD01002353.1 (2247 bp)
Overview 1 RT 1: 3-1980 bp Neighborhood of RT #1 [3, 2225] DDE_Tnp_IS66 PHA02517 PRK07818 RVT-GII GIIM Feature: gene Location: 3-560 bp Feature: domain Description: DDE_Tnp_IS66 Location: 111-543 bp Feature: domain Description: DDE_Tnp_IS66 Location: 111-543 bp Feature: gene Location: 526-972 bp Feature: domain Description: PHA02517 Location: 529-970 bp Feature: domain Description: PHA02 517 Location: 52 9-970 bp Feature: gene Location: 1089-2225 bp Feature: domain Description: PRK07818 Location: 1092-1194 bp Feature: domain Description: PRK07818 Location: 1092 -1194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1236-1707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 36-1707 bp Feature: domain Description: GIIM Note: maturase Location: 1782-1980 bp Feature: domain Description: GIIM Note: maturase Location: 1782 -1980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), PHA02517 (putative transposase OrfB; Reviewed), PRK07818 (dihydrolipoamide dehydrogenase; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CCCD01002519.1 (605 bp)
Overview 1 RT 1: 2-605 bp Neighborhood of RT #1 [2, 604] RVT-GII Feature: gene Location: 2-604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CCCD01002470.1 (984 bp)
Overview 1 RT 1: 128-983 bp Neighborhood of RT #1 [128, 982] RVT-GII Feature: gene Location: 128-982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 01-983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CCCD01002539.1 (552 bp)
Overview 1 RT 1: 101-278 bp Neighborhood of RT #1 [101, 517] RVT-GII Feature: gene Location: 101-517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107-278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CCCD01002361.1 (2379 bp)
Overview 1 RT 1: 1-1729 bp Neighborhood of RT #1 [1, 1794] RVT-GII PHA02517 Feature: gene Location: 1-720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-718 bp Feature: gene Location: 674-1099 bp Feature: gene Location: 1312-1794 bp Feature: domain Description: PHA02517 Location: 1375-1729 bp Feature: domain Description: PHA02517 Location: 1375-1729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)