myRT

myRT report for GCA_000940255.1_FHI15

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Seq: LM995613.1 (1000052 bp)
Overview 1 RT 1: 274129-278234 bp Neighborhood of RT #1 [274129, 278234] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 274129-274539 bp Feature: gene Location: 274759-275160 bp Feature: domain Description: DUF932 Location: 274870-275152 bp Feature: domain Description: DUF932 Location: 274870-2751 52 bp Feature: gene Location: 275652-277430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275913-276708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27591 3-276708 bp Feature: domain Description: Intron_maturas2 Location: 276834-277059 bp Feature: domain Description: Intron_maturas2 Location: 276834-277059 bp Feature: domain Description: HNHc Note: nucleases Location: 277254-277404 bp Feature: domain Description: HNHc Note: nucleases Location: 277254-277404 bp Feature: gene Location: 277603-277989 bp Feature: domain Description: DUF932 Location: 277609-277954 bp Feature: domain Description: DUF932 Location: 277609-277954 bp Feature: gene Location: 277989-278234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: LM995592.1 (15193 bp)
Overview 1 RT 1: 12642-15050 bp Neighborhood of RT #1 [12642, 15076] DUF905 DUF932 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 12642-12836 bp Feature: domain Description: DUF905 Location: 12702-12834 bp Feature: domain Description: DUF905 Location: 12 702 -12 834 bp Feature: gene Location: 12991-13359 bp Feature: domain Description: DUF932 Location: 13102-13357 bp Feature: domain Description: DUF932 Location: 13102 -13357 bp Feature: gene Location: 13829-15076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13898-14354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13898-14354 bp Feature: domain Description: Intron_maturas2 Location: 14480-14705 bp Feature: domain Description: Intron_maturas2 Location: 14480-14705 bp Feature: domain Description: HNHc Note: nucleases Location: 14900-15050 bp Feature: domain Description: HNHc Note: nucleases Location: 14900-15050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: LM995611.1 (708548 bp)
Overview 1 RT 1: 482180-486707 bp Neighborhood of RT #1 [482180, 486707] PRK15047 RutF RVT-GII GIIM Feature: gene Location: 482180-483025 bp Feature: domain Description: PRK15047 Location: 482183-483023 bp Feature: domain Description: PRK15047 Location: 482183 -483 023 bp Feature: gene Location: 483200-483769 bp Feature: domain Description: RutF Location: 483254-483758 bp Feature: domain Description: RutF Location: 483 254-483 758 bp Feature: gene Location: 484064-485563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484517-485174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484517-485174 bp Feature: domain Description: GIIM Note: maturase Location: 485258-485468 bp Feature: domain Description: GIIM Note: maturase Location: 485258-485468 bp Feature: gene Location: 485912-486286 bp Feature: gene Location: 486507-486707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15047 (N-hydroxyarylamine O-acetyltransferase; Provisional), RutF (TIGR03615), RVT-GII, GIIM (pfam08388)

Seq: LM995590.1 (94799 bp)
Overview 1 RT 1: 35114-38691 bp Neighborhood of RT #1 [35114, 38696] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 35114-35296 bp Feature: gene Location: 35525-35734 bp Feature: gene Location: 35869-37770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36136-36967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36136-36967 bp Feature: domain Description: Intron_maturas2 Location: 37081-37339 bp Feature: domain Description: Intron_maturas2 Location: 37081-37339 bp Feature: domain Description: HNHc Note: nucleases Location: 37513-37675 bp Feature: domain Description: HNHc Note: nucleases Location: 37513-37675 bp Feature: gene Location: 37965-38405 bp Feature: domain Description: PRK13732 Location: 37971-38403 bp Feature: domain Description: PRK13732 Location: 37971-384 03 bp Feature: gene Location: 38463-38696 bp Feature: domain Description: DUF905 Location: 38493-38691 bp Feature: domain Description: DUF905 Location: 384 93-38691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)