myRT

myRT report for GCA_000941195.1_57A_A8_assembly

Download annotations/find similar RTs

Seq: CDRQ01000497.1 (4404 bp)
Overview 1 RT 1: 3-4328 bp Neighborhood of RT #1 [3, 4330] DDE_Tnp_IS66 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3-881 bp Feature: domain Description: DDE_Tnp_IS66 Location: 111-879 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 1 -879 bp Feature: gene Location: 847-1293 bp Feature: domain Description: PHA02517 Location: 850-1291 bp Feature: domain Description: PHA0251 7 Location: 850-1 291 bp Feature: gene Location: 1410-2933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1683-2415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 683-241 5 bp Feature: domain Description: GIIM Note: maturase Location: 2490-2688 bp Feature: domain Description: GIIM Note: maturase Location: 2490-2688 bp Feature: gene Location: 3525-4004 bp Feature: domain Description: PHA02517 Location: 3585-3939 bp Feature: domain Description: PHA0251 7 Location: 3585-3939 bp Feature: gene Location: 4004-4330 bp Feature: domain Description: InsE Location: 4007-4328 bp Feature: domain Description: InsE Location: 4007-4328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050)

Seq: CDRQ01000485.1 (3845 bp)
Overview 1 RT 1: 2-3401 bp Neighborhood of RT #1 [2, 3401] DUF1380 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2-226 bp Feature: domain Description: DUF1380 Location: 23-221 bp Feature: domain Description: DUF1380 Location: 2 3-2 2 1 bp Feature: gene Location: 266-712 bp Feature: domain Description: PHA02517 Location: 269-710 bp Feature: domain Description: PHA02 517 Location: 2 69-710 bp Feature: gene Location: 829-2352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102 -1834 bp Feature: domain Description: GIIM Note: maturase Location: 1909-2107 bp Feature: domain Description: GIIM Note: maturase Location: 1909-2 107 bp Feature: gene Location: 2944-3423 bp Feature: domain Description: PHA02517 Location: 3004-3358 bp Feature: domain Description: PHA02 517 Location: 3004-3358 bp Feature: gene Location: 3273-3401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CDRQ01000623.1 (880 bp)
Overview 1 RT 1: 2-872 bp Neighborhood of RT #1 [2, 877] RVT-GII Feature: gene Location: 2-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII