myRT

myRT report for GCA_000943545.1_ASM94354v1

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Seq: JTHP01000159.1 Paenibacillus terrae strain NRRL B-30644 contig00159, whole genome shotgun sequence (1890 bp)
Overview 1 RT 1: 78-1287 bp Neighborhood of RT #1 [78, 1463] RVT-GII GIIM Feature: gene Location: 78-1463 bp Ori: KJD42245.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1 002 bp Feature: domain Description: GIIM Note: maturase Location: 1062-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1 062-1 287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JTHP01000140.1 Paenibacillus terrae strain NRRL B-30644 contig00140, whole genome shotgun sequence (6316 bp)
Overview 1 RT 1: 1-3284 bp Neighborhood of RT #1 [1, 5932] RVT-UG1 Feature: gene Location: 1-774 bp Feature: gene Location: 1108-1995 bp Feature: gene Location: 2057-5932 bp Ori: KJD42304.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2708-3284 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2 708-32 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1

Seq: JTHP01000158.1 Paenibacillus terrae strain NRRL B-30644 contig00158, whole genome shotgun sequence (1913 bp)
Overview 1 RT 1: 86-1331 bp Neighborhood of RT #1 [86, 1498] RVT-GII GIIM Feature: gene Location: 86-1498 bp Ori: KJD42246.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437-1052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 7-1052 bp Feature: domain Description: GIIM Note: maturase Location: 1106-1331 bp Feature: domain Description: GIIM Note: maturase Location: 1106-13 3 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JTHP01000102.1 Paenibacillus terrae strain NRRL B-30644 contig00102, whole genome shotgun sequence (13329 bp)
Overview 1 RT 1: 99-534 bp Neighborhood of RT #1 [99, 551] RVT-GII Feature: gene Location: 99-551 bp Ori: KJD42624.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JTHP01000153.1 Paenibacillus terrae strain NRRL B-30644 contig00153, whole genome shotgun sequence (2409 bp)
Overview 1 RT 1: 109-1864 bp Neighborhood of RT #1 [109, 1908] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 109-1908 bp Ori: KJD42251.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1171 bp Feature: domain Description: Intron_maturas2 Location: 1297-1522 bp Feature: domain Description: Intron_maturas2 Location: 1297-15 22 bp Feature: domain Description: HNHc Note: nucleases Location: 1702-1864 bp Feature: domain Description: HNHc Note: nucleases Location: 1702-1864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JTHP01000049.1 Paenibacillus terrae strain NRRL B-30644 contig00049, whole genome shotgun sequence (51833 bp)
Overview 1 RT 1: 25-1726 bp Neighborhood of RT #1 [25, 1848] RVT-GII HNHc Feature: gene Location: 25-1848 bp Ori: KJD43760.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316 -1012 bp Feature: domain Description: HNHc Note: nucleases Location: 1591-1726 bp Feature: domain Description: HNHc Note: nucleases Location: 1591-1726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JTHP01000044.1 Paenibacillus terrae strain NRRL B-30644 contig00044, whole genome shotgun sequence (55204 bp)
Overview 1 RT 1: 75-4482 bp Neighborhood of RT #1 [75, 4482] RVT-GII HNHc Feature: gene Location: 75-1994 bp Ori: KJD44007.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37 5-107 1 bp Feature: domain Description: HNHc Note: nucleases Location: 1728-1863 bp Feature: domain Description: HNHc Note: nucleases Location: 17 28-1863 bp Feature: gene Location: 2750-2989 bp Feature: gene Location: 3853-4482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JTHP01000018.1 Paenibacillus terrae strain NRRL B-30644 contig00018, whole genome shotgun sequence (90852 bp)
Overview 1 RT 1: 15691-23134 bp Neighborhood of RT #1 [15691, 23169] PerM oxido_grp_1 RVT-GII PRK05731 Feature: gene Location: 15691-16854 bp Ori: KJD45526.1 Feature: domain Description: PerM Location: 15772-16801 bp Feature: domain Description: PerM Location: 15772-168 01 bp Feature: gene Location: 16983-18002 bp Ori: KJD45527.1 Feature: domain Description: oxido_grp_1 Location: 16995-17976 bp Feature: domain Description: oxido_grp_1 Location: 16995-17976 bp Feature: gene Location: 19603-19977 bp Ori: KJD45528.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19870-19963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198 70-19963 bp Feature: gene Location: 21364-22194 bp Feature: gene Location: 22897-23169 bp Ori: KJD45530.1 Feature: domain Description: PRK05731 Location: 22972-23134 bp Feature: domain Description: PRK05731 Location: 22972-23134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerM (COG0628), oxido_grp_1 (TIGR03558), RVT-GII, PRK05731 (thiamine monophosphate kinase; Provisional)

Seq: JTHP01000061.1 Paenibacillus terrae strain NRRL B-30644 contig00061, whole genome shotgun sequence (37862 bp)
Overview 1 RT 1: 24602-27885 bp Neighborhood of RT #1 [24602, 27885] InsE Dcm RVT-GII Feature: gene Location: 24602-24883 bp Ori: KJD43304.1 Feature: domain Description: InsE Location: 24605-24875 bp Feature: domain Description: InsE Location: 24605-24875 bp Feature: gene Location: 24927-25262 bp Ori: KJD43305.1 Feature: domain Description: Dcm Location: 24948-25245 bp Feature: domain Description: Dcm Location: 249 48-25245 bp Feature: gene Location: 26436-27164 bp Ori: KJD43306.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26733-26961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26733-269 61 bp Feature: gene Location: 27192-27659 bp Feature: gene Location: 27673-27885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), Dcm (COG0270), RVT-GII

Seq: JTHP01000079.1 Paenibacillus terrae strain NRRL B-30644 contig00079, whole genome shotgun sequence (18532 bp)
Overview 1 RT 1: 16699-18382 bp Neighborhood of RT #1 [16699, 18492] RVT-GII U5_2-snRNA_bdg HNHc Feature: gene Location: 16699-18492 bp Ori: KJD42884.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16993-17689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16993-17689 bp Feature: domain Description: U5_2-snRNA_bdg Location: 17719-17983 bp Feature: domain Description: U5_2-snRNA_bdg Location: 17719-17983 bp Feature: domain Description: HNHc Note: nucleases Location: 18220-18382 bp Feature: domain Description: HNHc Note: nucleases Location: 18220-18382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, U5_2-snRNA_bdg (pfam10597), HNHc (smart00507)