myRT

myRT report for GCA_000944435.1_Ec57A_E8C1_MIRA_assembly

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Seq: CCCK01002687.1 (3795 bp)
Overview 1 RT 1: 176-3657 bp Neighborhood of RT #1 [176, 3659] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 176-502 bp Feature: domain Description: InsE Location: 179-500 bp Feature: domain Description: InsE Location: 1 79-500 bp Feature: gene Location: 742-981 bp Feature: domain Description: PHA02517 Location: 745-916 bp Feature: domain Description: PHA0251 7 Location: 745-91 6 bp Feature: gene Location: 1573-3096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1846-2578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 846-2578 bp Feature: domain Description: GIIM Note: maturase Location: 2653-2851 bp Feature: domain Description: GIIM Note: maturase Location: 2653-2851 bp Feature: gene Location: 3273-3659 bp Feature: domain Description: PHA02517 Location: 3276-3657 bp Feature: domain Description: PHA0251 7 Location: 3276-3657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CCCK01002830.1 (548 bp)
Overview 1 RT 1: 3-546 bp Neighborhood of RT #1 [3, 545] RVT-GII Feature: gene Location: 3-545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132-546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 -546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CCCK01002803.1 (716 bp)
Overview 1 RT 1: 1-715 bp Neighborhood of RT #1 [1, 714] RVT-GII Feature: gene Location: 1-714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CCCK01002549.1 (5280 bp)
Overview 1 RT 1: 1457-5272 bp Neighborhood of RT #1 [1457, 5277] PHA02517 RVT-GII GIIM PHA02517 psiB Feature: gene Location: 1457-1606 bp Feature: gene Location: 1710-2192 bp Feature: domain Description: PHA02517 Location: 1773-2127 bp Feature: domain Description: PHA02517 Location: 1773-2127 bp Feature: gene Location: 2784-4307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057-3789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057-3789 bp Feature: domain Description: GIIM Note: maturase Location: 3864-4062 bp Feature: domain Description: GIIM Note: maturase Location: 3864 -4 062 bp Feature: gene Location: 4484-4870 bp Feature: domain Description: PHA02517 Location: 4487-4868 bp Feature: domain Description: PHA02517 Location: 4 4 87-4 868 bp Feature: gene Location: 5008-5277 bp Feature: domain Description: psiB Location: 5011-5272 bp Feature: domain Description: psiB Location: 5011-5272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), psiB (PRK13701)

Seq: CCCK01002592.1 (5394 bp)
Overview 1 RT 1: 696-4884 bp Neighborhood of RT #1 [696, 4949] DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 696-1826 bp Feature: domain Description: DDE_Tnp_IS66 Location: 804-1671 bp Feature: domain Description: DDE_Tnp_IS66 Location: 804-1671 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1695-1803 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1695 -1803 bp Feature: gene Location: 1792-2238 bp Feature: domain Description: PHA02517 Location: 1795-2236 bp Feature: domain Description: PHA025 17 Location: 1795 -2236 bp Feature: gene Location: 2355-3878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2628-3360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2628-3360 bp Feature: domain Description: GIIM Note: maturase Location: 3435-3633 bp Feature: domain Description: GIIM Note: maturase Location: 3435 -3633 bp Feature: gene Location: 3832-4257 bp Feature: gene Location: 4470-4949 bp Feature: domain Description: PHA02517 Location: 4530-4884 bp Feature: domain Description: PHA025 17 Location: 45 30-4884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)