myRT

myRT report for GCA_000944855.1_138B_L1_assembly

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Seq: CDRN01001813.1 (3098 bp)
Overview 1 RT 1: 870-2868 bp Neighborhood of RT #1 [870, 3023] PRK10682 RVT_N RVT-GII GIIM Feature: gene Location: 870-1070 bp Feature: domain Description: PRK10682 Location: 873-1059 bp Feature: domain Description: PRK1 0682 Location: 873-1 059 bp Feature: gene Location: 1143-1325 bp Feature: gene Location: 1605-3023 bp Feature: domain Description: RVT_N Location: 1653-1890 bp Feature: domain Description: RVT_N Location: 1 653-1 890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1941-2583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 941 -2583 bp Feature: domain Description: GIIM Note: maturase Location: 2634-2868 bp Feature: domain Description: GIIM Note: maturase Location: 2634-2868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10682 (putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CDRN01000192.1 (5230 bp)
Overview 1 RT 1: 2942-5212 bp Neighborhood of RT #1 [2942, 5229] PRK11569 RVT-GII Feature: gene Location: 2942-3436 bp Feature: gene Location: 3754-4617 bp Feature: domain Description: PRK11569 Location: 3796-4615 bp Feature: domain Description: PRK11569 Location: 3796-4615 bp Feature: gene Location: 5074-5229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5122-5212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512 2 -52 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11569 (glyoxylate bypass operon transcriptional repressor IclR), RVT-GII

Seq: CDRN01000925.1 (2868 bp)
Overview 1 RT 1: 332-2765 bp Neighborhood of RT #1 [332, 2833] Psu RVT-UG17 PRTases_typeI PRK08006 Feature: gene Location: 332-904 bp Feature: domain Description: Psu Location: 350-887 bp Feature: domain Description: Psu Location: 3 50-887 bp Feature: gene Location: 957-1106 bp Feature: gene Location: 1229-2833 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1466-2078 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1466-2078 bp Feature: domain Description: PRTases_typeI Location: 2441-2588 bp Feature: domain Description: PRTases_typeI Location: 2441-2588 bp Feature: domain Description: PRK08006 Location: 2597-2765 bp Feature: domain Description: PRK08006 Location: 2597-2765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, PRTases_typeI (cl00309), PRK08006 (replicative DNA helicase DnaB)