myRT

myRT report for GCA_000945835.1_Ec207A_L2_MIRA_assembly

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Seq: CCCB01001402.1 (1124 bp)
Overview 1 RT 1: 289-1032 bp Neighborhood of RT #1 [289, 1121] PRK13532 RVT-GII Feature: gene Location: 289-489 bp Feature: gene Location: 560-772 bp Feature: domain Description: PRK13532 Location: 563-713 bp Feature: domain Description: PRK1 3532 Location: 563-71 3 bp Feature: gene Location: 780-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888-1032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888-1 032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13532 (nitrate reductase catalytic subunit NapA), RVT-GII

Seq: CCCB01000217.1 (3159 bp)
Overview 1 RT 1: 46-3093 bp Neighborhood of RT #1 [46, 3158] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 46-492 bp Feature: domain Description: PHA02517 Location: 49-490 bp Feature: domain Description: PHA02 517 Location: 49-490 bp Feature: gene Location: 609-2132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 -1614 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1887 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1887 bp Feature: gene Location: 2086-2511 bp Feature: gene Location: 2724-3158 bp Feature: domain Description: PHA02517 Location: 2739-3093 bp Feature: domain Description: PHA02 517 Location: 2 739-3093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CCCB01000784.1 (5730 bp)
Overview 1 RT 1: 177-1549 bp Neighborhood of RT #1 [177, 1554] RVT-UG11 ManZ PRK11278 Feature: gene Location: 177-674 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 252-513 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 252-513 bp Feature: gene Location: 533-937 bp Feature: domain Description: ManZ Location: 596-812 bp Feature: domain Description: ManZ Location: 596-812 bp Feature: gene Location: 1105-1554 bp Feature: domain Description: PRK11278 Location: 1117-1549 bp Feature: domain Description: PRK11278 Location: 1117-1549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, ManZ (COG3716), PRK11278 (NADH-quinone oxidoreductase subunit NuoF)

Seq: CCCB01001008.1 (5216 bp)
Overview 1 RT 1: 3741-4835 bp Neighborhood of RT #1 [3741, 5020] CbeA_antitoxin CbtA_toxin RVT-UG11 Feature: gene Location: 3741-4058 bp Feature: domain Description: CbeA_antitoxin Location: 3756-4053 bp Feature: domain Description: CbeA_antitoxin Location: 3756-4 053 bp Feature: gene Location: 4079-4408 bp Feature: domain Description: CbtA_toxin Location: 4082-4403 bp Feature: domain Description: CbtA_toxin Location: 4 082-4 4 03 bp Feature: gene Location: 4721-5020 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4724-4835 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4 724 -4 835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbeA_antitoxin (pfam06154), CbtA_toxin (pfam06755), RVT-UG11