myRT

myRT report for GCA_000947695.1_Velvet_assembly

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Seq: CEIW01000010.1 Streptococcus suis genome assembly Velvet_assembly, contig NODE_10_length_193095_cov_19.678402, whole genome shotgun sequence (193153 bp)
Overview 1 RT 1: 139866-149644 bp Neighborhood of RT #1 [139866, 149644] KOG1000 KOG4768 RVT-GII N6_Mtase COG4646 Feature: gene Location: 139866-141209 bp Feature: domain Description: KOG1000 Location: 140145-140460 bp Feature: domain Description: KOG1 000 Location: 1 401 45-1 40460 bp Feature: gene Location: 141347-142144 bp Feature: domain Description: KOG4768 Location: 141356-142130 bp Feature: domain Description: KOG4768 Location: 1 41 356-1 421 30 bp Feature: gene Location: 142159-143124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142420-143119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42420-1 431 1 9 bp Feature: gene Location: 143622-149084 bp Feature: domain Description: N6_Mtase Location: 145635-146226 bp Feature: domain Description: N6_Mtase Location: 1 45635-1 46226 bp Feature: domain Description: COG4646 Location: 146817-148941 bp Feature: domain Description: COG4646 Location: 1 4681 7-1 48941 bp Feature: gene Location: 149135-149644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )