myRT

myRT report for GCA_000950675.1_ASM95067v1

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Seq: BBUG01000033.1 Legionella pneumophila DNA, contig: lpbnt_contig000033, strain: Bnt314, whole genome shotgun sequence (58313 bp)
Overview 1 RT 1: 6225-12950 bp Neighborhood of RT #1 [6225, 12950] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 6225-6602 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 6252-6588 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 6252-6588 bp Feature: gene Location: 6908-8359 bp Feature: domain Description: Tnp_DNA_bind Location: 6947-7115 bp Feature: domain Description: Tnp_DNA_bind Location: 6947-71 1 5 bp Feature: domain Description: DDE_Tnp_1 Location: 7772-8066 bp Feature: domain Description: DDE_Tnp_1 Location: 7772-8066 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 8072-8351 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 8072-8351 bp Feature: gene Location: 8430-9950 bp Feature: RT Description: RVT_N Location: 8487-8730 bp Feature: RT Description: RVT_N Location: 8487-8730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8775-9399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8775-9399 bp Feature: domain Description: GIIM Note: maturase Location: 9450-9684 bp Feature: domain Description: GIIM Note: maturase Location: 9450-9684 bp Feature: gene Location: 10843-11172 bp Feature: domain Description: Tra_M Location: 10846-11041 bp Feature: domain Description: Tra_M Location: 1 0846-1 1 041 bp Feature: gene Location: 11370-12950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: BBUG01000002.1 Legionella pneumophila DNA, contig: lpbnt_contig000002, strain: Bnt314, whole genome shotgun sequence (7714 bp)
Overview 1 RT 1: 119-4057 bp Neighborhood of RT #1 [119, 4057] PHA02517 RVT-GII GIIM InsE Feature: gene Location: 119-403 bp Feature: gene Location: 796-1623 bp Feature: domain Description: PHA02517 Location: 811-1597 bp Feature: domain Description: PHA02 517 Location: 811-1597 bp Feature: gene Location: 1771-3015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1975-2632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1975-2 632 bp Feature: domain Description: GIIM Note: maturase Location: 2713-2929 bp Feature: domain Description: GIIM Note: maturase Location: 2 713-2 92 9 bp Feature: gene Location: 3546-3839 bp Feature: domain Description: InsE Location: 3558-3819 bp Feature: domain Description: InsE Location: 3558-3819 bp Feature: gene Location: 3890-4057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: BBUG01000015.1 Legionella pneumophila DNA, contig: lpbnt_contig000015, strain: Bnt314, whole genome shotgun sequence (55551 bp)
Overview 1 RT 1: 6394-12739 bp Neighborhood of RT #1 [6394, 12739] Phage_int_SAM_2 Integrase_1 Phage_int_SAM_2 RVT-Retrons DegQ conj_TOL_TraD Feature: gene Location: 6394-7293 bp Feature: domain Description: Phage_int_SAM_2 Location: 6460-6682 bp Feature: domain Description: Phage_int_SAM_2 Location: 6460-6682 bp Feature: domain Description: Integrase_1 Location: 6763-7108 bp Feature: domain Description: Integrase_1 Location: 6763 -7108 bp Feature: gene Location: 7286-8092 bp Feature: domain Description: Phage_int_SAM_2 Location: 7337-7544 bp Feature: domain Description: Phage_int_SAM_2 Location: 73 3 7-7544 bp Feature: gene Location: 8672-10297 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8801-9404 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8801-9404 bp Feature: domain Description: DegQ Location: 9737-10268 bp Feature: domain Description: DegQ Location: 973 7-10268 bp Feature: gene Location: 10479-12413 bp Feature: domain Description: conj_TOL_TraD Location: 10497-12405 bp Feature: domain Description: conj_TOL_TraD Location: 10497-12405 bp Feature: gene Location: 12410-12739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_TOL_TraD (TIGR03754), Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), RVT-Retrons, DegQ (pfam08181)