myRT

myRT report for GCA_000954035.1_ASM95403v1

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Seq: JYHQ01000129.1 (8133 bp)
Overview 1 RT 1: 751-3590 bp Neighborhood of RT #1 [751, 3595] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 751-2652 bp Ori: KJJ75134.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018-1849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 8-1 849 bp Feature: domain Description: Intron_maturas2 Location: 1963-2221 bp Feature: domain Description: Intron_maturas2 Location: 1 963-2221 bp Feature: domain Description: HNHc Note: nucleases Location: 2395-2557 bp Feature: domain Description: HNHc Note: nucleases Location: 2395-2557 bp Feature: gene Location: 2847-3299 bp Ori: KJJ75135.1 Gene: ssb_2 Feature: domain Description: PRK13732 Location: 2850-3297 bp Feature: domain Description: PRK1 3732 Location: 2850-3297 bp Feature: gene Location: 3362-3595 bp Ori: KJJ75136.1 Feature: domain Description: DUF905 Location: 3392-3590 bp Feature: domain Description: DUF905 Location: 3392-3590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: JYHQ01000080.1 (196160 bp)
Overview 1 RT 1: 74439-79106 bp Neighborhood of RT #1 [74439, 79198] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 74439-75467 bp Ori: KJJ79299.1 Feature: domain Description: PRK09692 Location: 74445-75450 bp Feature: domain Description: PRK09692 Location: 74445-75450 bp Feature: gene Location: 75484-76125 bp Ori: KJJ79300.1 Feature: domain Description: SLATT_5 Location: 75487-76093 bp Feature: domain Description: SLATT_5 Location: 75487-76093 bp Feature: gene Location: 76320-77729 bp Ori: KJJ79301.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 76557-77169 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 76557-77169 bp Feature: gene Location: 78052-78624 bp Ori: KJJ79302.1 Gene: psu Feature: domain Description: Psu Location: 78070-78607 bp Feature: domain Description: Psu Location: 78070-78607 bp Feature: gene Location: 78698-79198 bp Ori: KJJ79303.1 Feature: domain Description: PRK09678 Location: 78701-78833 bp Feature: domain Description: PRK09678 Location: 78701-78833 bp Feature: domain Description: PRK09678 Location: 78956-79106 bp Feature: domain Description: PRK09678 Location: 78956-79106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)