myRT

myRT report for GCA_000955975.1_ASM95597v1

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Seq: JYJF01000103.1 Saccharothrix sp. ST-888 contig-102, whole genome shotgun sequence (27732 bp)
Overview 1 RT 1: 19834-22885 bp Neighborhood of RT #1 [19834, 22899] YfmG RVT-CRISPR-like NrdG PTPS Feature: gene Location: 19834-20277 bp Feature: gene Location: 20274-20828 bp Ori: KJK55857.1 Feature: domain Description: YfmG Location: 20409-20823 bp Feature: domain Description: YfmG Location: 20409-20823 bp Feature: gene Location: 20851-21633 bp Ori: KJK55858.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 21058-21595 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 21 058-21 595 bp Feature: gene Location: 21791-22504 bp Ori: KJK55871.1 Feature: domain Description: NrdG Location: 21836-22484 bp Feature: domain Description: NrdG Location: 21 836-22484 bp Feature: gene Location: 22513-22899 bp Ori: KJK55872.1 Feature: domain Description: PTPS Location: 22534-22885 bp Feature: domain Description: PTPS Location: 22534-22885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-CRISPR, NrdG (TIGR02491), PTPS (pfam01242)

Seq: JYJF01000022.1 Saccharothrix sp. ST-888 contig-21, whole genome shotgun sequence (68295 bp)
Overview 1 RT 1: 52784-57956 bp Neighborhood of RT #1 [52784, 57997] EGL9 RVT-GII WXG100 WXG100 Feature: gene Location: 52784-53437 bp Ori: KJK58394.1 Feature: domain Description: EGL9 Location: 53024-53414 bp Feature: domain Description: EGL9 Location: 5302 4-53414 bp Feature: gene Location: 53766-54500 bp Feature: gene Location: 54777-54962 bp Ori: KJK58396.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54780-54957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54780-54957 bp Feature: gene Location: 55205-55717 bp Feature: gene Location: 57695-57997 bp Ori: KJK58398.1 Feature: domain Description: WXG100 Location: 57728-57803 bp Feature: domain Description: WXG100 Location: 5772 8-57803 bp Feature: domain Description: WXG100 Location: 57842-57956 bp Feature: domain Description: WXG100 Location: 57842 -57956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EGL9 (COG3751), RVT-GII, WXG100 (pfam06013)