myRT

myRT report for GCA_000956195.1_ASM95619v1

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Seq: JSUW01000063.1 Lactobacillus plantarum strain CIP104448 contig_63, whole genome shotgun sequence (9890 bp)
Overview 1 RT 1: 5115-9098 bp Neighborhood of RT #1 [5115, 9098] HTH_ARSR DDE_Tnp_Tn3 RVT-GII GIIM PRK09564 Feature: gene Location: 5115-5468 bp Feature: domain Description: HTH_ARSR Location: 5175-5388 bp Feature: domain Description: HTH_ARSR Location: 51 75-5388 bp Feature: gene Location: 5674-6015 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 5680-5947 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 5680-5947 bp Feature: gene Location: 6266-7081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6269-6635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6269-6635 bp Feature: domain Description: GIIM Note: maturase Location: 6689-6917 bp Feature: domain Description: GIIM Note: maturase Location: 6689-691 7 bp Feature: gene Location: 7216-8580 bp Feature: domain Description: PRK09564 Location: 7231-8554 bp Feature: domain Description: PRK09564 Location: 7231 -8554 bp Feature: gene Location: 8712-9098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388), PRK09564 (coenzyme A disulfide reductase; Reviewed)